RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ASB16Q96NS5 453 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CDCA4Q9BXL8 241 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 WDR37Q9Y2I8 494 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 XIRP2A4UGR9 3374 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MDC1Q14676 2089 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 IGKV1-8A0A0C4DH67 115 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SH3D21A4FU49 640 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TBC1D3BA6NDS4 549 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 WASHC1A8K0Z3 465 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ENTPD6O75354 484 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 PRKRAO75569 313 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 UPK1BO75841 260 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 STATHP02808 62 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 RPN2P04844 631 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ALOX5P09917 674 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TAS2R38P59533 333 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 UBE3AQ05086 875 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SYPL1Q16563 259 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TSTQ16762 297 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TMEM240Q5SV17 173 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 WASH2PQ6VEQ5 465 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OLIG3Q7RTU3 272 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ADGRD2Q7Z7M1 963 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CACTIN-AS1Q8N1I8 211 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TP53I13Q8NBR0 393 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 FAM46DQ8NEK8 389 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 KBTBD8Q8NFY9 601 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OR5D16Q8NGK9 328 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 DHRS1Q96LJ7 313 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF354BQ96LW1 612 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TEFMQ96QE5 360 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TREX2Q9BQ50 279 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 UCK2Q9BZX2 261 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MBNL1Q9NR56 388 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ABCB10Q9NRK6 738 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CLN6Q9NWW5 311 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CCDC59Q9P031 241 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 WBP11Q9Y2W2 641 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OR1A2Q9Y585 309 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TLR4O00206 839 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 LATO43561 262 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SLC28A2O43868 658 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OR10H3O60404 316 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MPZL2O60487 215 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SLC35G4P0C7Q5 338 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OR12D1P0DN82 309 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OSMP13725 252 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MYOGP15173 224 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 PTGER1P34995 402 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 KCNJ5P48544 419 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CCT3P49368 545 aaKnown RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 CSNK1G2P78368 415 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OLR1P78380 273 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SLC13A2Q13183 592 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MLF2Q15773 248 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 DCST1Q5T197 706 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 AGAP7PQ5VUJ5 663 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 PLAG1Q6DJT9 500 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SZRD1Q7Z422 152 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ATCAYQ86WG3 371 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 LYSMD2Q8IV50 215 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 FAM20CQ8IXL6 584 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 AMER2Q8N7J2 671 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 C9orf43Q8TAL5 461 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 RGMAQ96B86 450 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ZBED6CLQ96FA7 236 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 OTUB1Q96FW1 271 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-204ENST00000501271 MGLLQ99685 303 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 C17orf62Q9BQA9 187 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 XKR8Q9H6D3 395 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 SEMA3GQ9NS98 782 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 DNAJC27Q9NZQ0 273 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 TMCC3Q9ULS5 477 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 A3GALT2U3KPV4 340 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
CLIP1-204ENST00000501271 A0A0A6YYD5 115 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 M0R3H8 397 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ARHGAP33O14559 1287 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 TBX1O43435 398 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ATP6V1G1O75348 118 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PDE9AO76083 593 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SERPIND1P05546 499 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
CLIP1-204ENST00000501271 ACP5P13686 325 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 HSD17B2P37059 387 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 UGT2B15P54855 530 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 SSX1Q16384 188 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 AGBL4Q5VU57 503 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 STEAP3Q658P3 488 aa9.33□□□□□ -0.92
CLIP1-204ENST00000501271 PGBD2Q6P3X8 592 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms