RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CTDSP2O14595 271 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 ANXA5P08758 320 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 INHBBP09529 407 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SDC1P18827 310 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 MC5RP33032 325 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 GZMMP51124 257 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 BMXP51813 675 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 ISL1P61371 349 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PTSQ03393 145 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 GRSF1Q12849 480 aaKnown RBP eCLIP8.51□□□□□ -1.05
FN1-227ENST00000498719 CEBPEQ15744 281 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SPOUT1Q5T280 376 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 TTC23Q5W5X9 447 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 OR4F3Q6IEY1 312 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SERPINA13PQ6UXR4 307 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 Q6ZNB5 142 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 ELMOD2Q8IZ81 293 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PARP8Q8N3A8 854 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PNPT1Q8TCS8 783 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 GIPC3Q8TF64 312 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 APOLD1Q96LR9 279 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 MYOCQ99972 504 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 ATG10Q9H0Y0 220 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 ATP13A3Q9H7F0 1226 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.51□□□□□ -1.05
FN1-227ENST00000498719 CLEC1BQ9P126 229 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 ASH2LQ9UBL3 628 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 WARS2Q9UGM6 360 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 ERVK-11Q9UQG0 969 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SLC22A14Q9Y267 594 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 CCDC88CQ9P219 2028 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GOLGA4Q13439 2230 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 A0A1W2PQ67 120 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 PER2O15055 1255 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SLC16A6O15403 523 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SH3BGRLO75368 114 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 WDR47O94967 919 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SCELO95171 688 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 ZNF682O95780 498 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 HPRP00739 348 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 EGR1P18146 543 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 S100A3P33764 101 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 AQP6Q13520 282 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 BOP1Q14137 746 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 SPCS2Q15005 226 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 PTCHD3Q3KNS1 767 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 CARD16Q5EG05 197 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 DOK6Q6PKX4 331 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 KANSL1Q7Z3B3 1105 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 UBE3DQ7Z6J8 389 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 CALHM3Q86XJ0 350 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 DCP2Q8IU60 420 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 ZNF555Q8NEP9 628 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 UBTD2Q8WUN7 234 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RAX2Q96IS3 184 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RBM4BQ9BQ04 359 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 RHNO1Q9BSD3 238 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RBM4Q9BWF3 364 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 CCDC90BQ9GZT6 254 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 KCNH6Q9H252 994 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SLC32A1Q9H598 525 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 ELOVL6Q9H5J4 265 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 EVA1AQ9H8M9 152 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 VPS4AQ9UN37 437 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 ABCG2Q9UNQ0 655 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 NINQ8N4C6 2090 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GLOD5A6NK44 160 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 FAM47E-STBD1D6RA91 191 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SLC1A7O00341 560 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RRP8O43159 456 aaKnown RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 ZBTB11O95625 1053 aaPredicted RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 KRT6AP02538 564 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 FTH1P02794 183 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 KRT6BP04259 564 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 RETP07949 1114 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 JUNBP17275 347 aaPredicted RBP8.5□□□□□ -1.05
FN1-227ENST00000498719 CYP2A7P20853 494 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GSTM2P28161 218 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 EPHA2P29317 976 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 NSG1P42857 185 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 KRT6CP48668 564 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 TMBIM6P55061 237 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 CLDN8P56748 225 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 C21orf59P57076 290 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 HYAL4Q2M3T9 481 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 LAIR1Q6GTX8 287 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GRAMD4Q6IC98 578 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GALNT18Q6P9A2 607 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 SLC36A4Q6YBV0 504 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 Q6ZNX1 250 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 GAREM2Q75VX8 874 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 VTCN1Q7Z7D3 282 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 CYP4Z1Q86W10 505 aa8.5□□□□□ -1.05
FN1-227ENST00000498719 CROCCP3Q8IVE0 287 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms