RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 SH2D1BO14796 132 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CHADO15335 359 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 KIAA0513O60268 411 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ANGPTL1O95841 491 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 PAK4O96013 591 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 IGHEP01854 428 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 VTNP04004 478 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 PCCBP05166 539 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 SERPINF2P08697 491 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CALCBP10092 127 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RRASP10301 218 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 EPB41P11171 864 aaKnown RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 MBL2P11226 248 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 PTPN4P29074 926 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 DLSTP36957 453 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 MMP12P39900 470 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 PRPHP41219 470 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CCR4P51679 360 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RPL27P61353 136 aaKnown RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 POU3F1Q03052 451 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 RBBP4Q09028 425 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 FUT7Q11130 342 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 PDZK1IP1Q13113 114 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 MEF2DQ14814 521 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 TAB1Q15750 504 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ZNF528Q3MIS6 628 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RFTN2Q52LD8 501 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 C9orf50Q5SZB4 431 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RIPPLY2Q5TAB7 128 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 PWWP2BQ6NUJ5 590 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 NEPROQ6NW34 567 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 STEAP1BQ6NZ63 245 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CDHR3Q6ZTQ4 885 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 LCA5Q86VQ0 697 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 SLC22A16Q86VW1 577 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 SLC22A15Q8IZD6 547 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CERS5Q8N5B7 392 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CNBD1Q8NA66 436 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 FAM71CQ8NEG0 241 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 OR9Q2Q8NGE9 314 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 OR4D10Q8NGI6 311 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ZNRF4Q8WWF5 429 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RBM18Q96H35 190 aaKnown RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 LURAP1Q96LR2 239 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 INPP4AQ96PE3 977 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 UHRF2Q96PU4 802 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RAB40CQ96S21 281 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ERP44Q9BS26 406 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 TPPP3Q9BW30 176 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 NMNAT2Q9BZQ4 307 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 FNDC4Q9H6D8 234 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 PLEKHA3Q9HB20 300 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 SDF2L1Q9HCN8 221 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 SPHK2Q9NRA0 654 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 TEX10Q9NXF1 929 aaPredicted RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 LHX3Q9UBR4 397 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 MRPS28Q9Y2Q9 187 aaKnown RBP3.17□□□□□ -1.9
CALD1-224ENST00000498254 KIF3AQ9Y496 699 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 UMODL1Q5DID0 1318 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 RAD54L2Q9Y4B4 1467 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 A0A087WW49 117 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 OR5H15A6NDH6 313 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 H0YCG3 227 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 H3BMH7 237 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 CLDN3O15551 220 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 TOM1L1O75674 476 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 PRAMEF12O95522 483 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 APBB3O95704 486 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 MBD3O95983 291 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 IGLV2-11P01706 119 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 TPM2P07951 284 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 PATE4P0C8F1 98 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 PRG2P13727 222 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 TSPAN8P19075 237 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 FCARP24071 287 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 IL4RP24394 825 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 GPR183P32249 361 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 TRIM23P36406 574 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 MTIF2P46199 727 aaKnown RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 FHITP49789 147 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 RAG2P55895 527 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 ABCE1P61221 599 aaKnown RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 DHODHQ02127 395 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 MECOMQ03112 1051 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 MFGE8Q08431 387 aaPredicted RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 NFATC2Q13469 925 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 KLF5Q13887 457 aaPredicted RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 ADPRMQ3LIE5 342 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 CCDC73Q6ZRK6 1079 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 ASRGL1Q7L266 308 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 ITIH5Q86UX2 942 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 CATSPERDQ86XM0 798 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 UNC5CLQ8IV45 518 aa3.16□□□□□ -1.9
CALD1-224ENST00000498254 APLFQ8IW19 511 aaPredicted RBP3.16□□□□□ -1.9
CALD1-224ENST00000498254 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms