RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TRAV9-2A0A087WT02 112 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 MAGEB16A2A368 324 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 MCF2LO15068 1137 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 STX6O43752 255 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 SLC16A8O95907 504 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 MMP10P09238 476 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 CCDC159P0C7I6 412 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 OR1D2P34982 312 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ALDH3B1P43353 468 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ADARP55265 1226 aaKnown RBP2.5□□□□□ -2.01
SMC4-227ENST00000497984 RIPK4P57078 832 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 GSTO1P78417 241 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 SLC17A1Q14916 467 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 SLC22A6Q4U2R8 563 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 CGB2Q6NT52 195 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 PODNL1Q6PEZ8 512 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ABRAXAS1Q6UWZ7 409 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 AQP12AQ8IXF9 295 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ARL14Q8N4G2 192 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ICA1LQ8NDH6 482 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 OR1K1Q8NGR3 316 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 SPATA18Q8TC71 538 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 U2AF1L4Q8WU68 220 aaKnown RBP2.5□□□□□ -2.01
SMC4-227ENST00000497984 ULK4Q96C45 1275 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 CCDC114Q96M63 670 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 S1PR3Q99500 378 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ZNF559Q9BR84 538 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 DEFB126Q9BYW3 111 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 CUEDC2Q9H467 287 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 TMEM206Q9H813 350 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 MYOZ2Q9NPC6 264 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ABCC13Q9NSE7 274 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 DNAJC17Q9NVM6 304 aaKnown RBP2.5□□□□□ -2.01
SMC4-227ENST00000497984 ARMCX1Q9P291 453 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 ARMCX3Q9UH62 379 aaPredicted RBP2.5□□□□□ -2.01
SMC4-227ENST00000497984 ERVK-19Q9WJR5 959 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 PLEKHA6Q9Y2H5 1048 aa2.5□□□□□ -2.01
SMC4-227ENST00000497984 KAT6BQ8WYB5 2073 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 ACEP12821 1306 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 ZSCAN5CA6NGD5 496 aaPredicted RBP2.49□□□□□ -2.01
SMC4-227ENST00000497984 CHUKO15111 745 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 GH1P01241 217 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 FCGR3AP08637 254 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 SNRPCP09234 159 aaKnown RBP2.49□□□□□ -2.01
SMC4-227ENST00000497984 GJB2P29033 226 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 PPP2R1BP30154 601 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 TNFRSF4P43489 277 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 RPL27P61353 136 aaKnown RBP2.49□□□□□ -2.01
SMC4-227ENST00000497984 HSPA14Q0VDF9 509 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 SPHARQ15513 63 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 MEP1BQ16820 701 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD55Q3KP44 614 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 FAM133BQ5BKY9 247 aaKnown RBP2.49□□□□□ -2.01
SMC4-227ENST00000497984 SIGLEC15Q6ZMC9 328 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 NAXDQ8IW45 347 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 TBCKQ8TEA7 893 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 TEKT1Q969V4 418 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 CDKN2AIPNLQ96HQ2 116 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 PPP1R16AQ96I34 528 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 SIGLEC12Q96PQ1 595 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 SPAG8Q99932 426 aaPredicted RBP2.49□□□□□ -2.01
SMC4-227ENST00000497984 TEKT2Q9UIF3 430 aa2.49□□□□□ -2.01
SMC4-227ENST00000497984 PSMA7O14818 248 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CSO75390 466 aaKnown RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 RHBDL1O75783 438 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CT45A8P0DMV1 189 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CT45A9P0DMV2 189 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 MEOX2P50222 304 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 HMGCS2P54868 508 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 SLC12A3P55017 1021 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 UCNP55089 124 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ABRAXAS2Q15018 415 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 OR1C1Q15619 314 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD20A4Q4UJ75 823 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD20A8PQ5CZ79 823 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CT45A2Q5DJT8 189 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 NHSL2Q5HYW2 709 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD20A2Q5SQ80 823 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD20A1Q5TYW2 823 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ANKRD20A3Q5VUR7 823 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 WDR25Q64LD2 544 aaPredicted RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 CD164L2Q6UWJ8 174 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ZNF525Q8N782 197 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ZNF491Q8N8L2 437 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CCDC197Q8NCU1 140 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 PRCCQ92733 491 aaPredicted RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 GGHQ92820 318 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 MRPL24Q96A35 216 aaKnown RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 PNPLA2Q96AD5 504 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ZNF799Q96GE5 643 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 C16orf58Q96GQ5 468 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ZMAT2Q96NC0 199 aaKnown RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 GUCD1Q96NT3 240 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 MCCC1Q96RQ3 725 aaPredicted RBP2.48□□□□□ -2.01
SMC4-227ENST00000497984 C19orf43Q9BQ61 176 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 TTYH2Q9BSA4 534 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 PAXXQ9BUH6 204 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 WWP1Q9H0M0 922 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 ZNF275Q9NSD4 429 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms