RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SNX11Q9Y5W9 270 aa7.93□□□□□ -1.14
USP54-215ENST00000497106 CLCA3PQ9Y6N3 262 aa7.93□□□□□ -1.14
USP54-215ENST00000497106 A0A1B0GTQ1 180 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ANKRD28O15084 1053 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 NSA2O95478 260 aaKnown RBP7.92□□□□□ -1.14
USP54-215ENST00000497106 HPRP00739 348 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 GPX2P18283 190 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 EFNA1P20827 205 aaPredicted RBP7.92□□□□□ -1.14
USP54-215ENST00000497106 OR4D2P58180 307 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 SHC2P98077 582 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PLK5Q496M5 336 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CYBRD1Q53TN4 286 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 DLEU7Q6UYE1 221 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ANKFN1Q8N957 763 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 OR5AK3PQ8NH89 298 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 LRTOMTQ8WZ04 291 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PMM1Q92871 262 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 DUS3LQ96G46 650 aaKnown RBP7.92□□□□□ -1.14
USP54-215ENST00000497106 EGLN2Q96KS0 407 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ARPC5LQ9BPX5 153 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 DOHHQ9BU89 302 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 G6PC3Q9BUM1 346 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 SEMA6AQ9H2E6 1030 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 EQTNQ9NQ60 294 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 TICRRQ7Z2Z1 1910 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 AHCYL1O43865 530 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PRAMEF2O60811 474 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 UGT2B11O75310 529 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PRKD3O94806 890 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 STATHP02808 62 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 BCHEP06276 602 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PVRP15151 417 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 IL1RNP18510 177 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 DNAJA1P31689 397 aaKnown RBP7.92□□□□□ -1.14
USP54-215ENST00000497106 UGT2B15P54855 530 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 IER5LQ5T953 404 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PRR23CQ6ZRP0 262 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 DEPDC4Q8N2C3 294 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 EID2Q8N6I1 236 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CDRT4Q8N9R6 151 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ZNF527Q8NB42 609 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CREB3L4Q8TEY5 395 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 NEURL3Q96EH8 262 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 MAP3K3Q99759 626 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 TMEM38AQ9H6F2 299 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CAPN10Q9HC96 672 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ADAP2Q9NPF8 381 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CCDC160A6NGH7 325 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 TNFAIP8O95379 198 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ATXN8OSP0DMR3 200 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CDK4P11802 303 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CPMP14384 443 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 EEF1B2P24534 225 aaKnown RBP7.92□□□□□ -1.14
USP54-215ENST00000497106 CMPK2Q5EBM0 449 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 OR2T5Q6IEZ7 315 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 SLC29A4Q7RTT9 530 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 AMIGO2Q86SJ2 522 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 RNF175Q8N4F7 328 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 ANKRD53Q8N9V6 530 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 OR2T29Q8NH02 315 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 B4GALNT2Q8NHY0 566 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP54-215ENST00000497106 ZFP90Q8TF47 636 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CCDC74AQ96AQ1 378 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 OR51I1Q9H343 314 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 CD93Q9NPY3 652 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 NDUFA13Q9P0J0 144 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 PLXNA2O75051 1894 aa7.92□□□□□ -1.14
USP54-215ENST00000497106 GOLGB1Q14789 3259 aaKnown RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 A6NCN8 305 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ARHGAP33O14559 1287 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 FLRT2O43155 660 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ANXA8P13928 327 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 NAT1P18440 290 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 FPR1P21462 350 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 PEX19P40855 299 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 POU6F2P78424 691 aaPredicted RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 FGD3Q5JSP0 725 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 TMEM71Q6P5X7 295 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 TTC33Q6PID6 262 aaPredicted RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 CYP4Z2PQ8N1L4 340 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ZNF614Q8N883 585 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 OR4C6Q8NH72 309 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 CDC6Q99741 560 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 CNPPD1Q9BV87 410 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 SMPD3Q9NY59 655 aaPredicted RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 KLF15Q9UIH9 416 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ANTXRLA6NF34 631 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 A8MU76 341 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 TNFRSF11BO00300 401 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ASNA1O43681 348 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 GALR3O60755 368 aaPredicted RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 ARAFP10398 606 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 RGS8P57771 180 aaPredicted RBP7.91□□□□□ -1.14
USP54-215ENST00000497106 HLA-BQ31612 363 aa7.91□□□□□ -1.14
USP54-215ENST00000497106 ADPRMQ3LIE5 342 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms