RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ACPTQ9BZG2 426 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 CCDC134Q9H6E4 229 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 APMAPQ9HDC9 416 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 LY6G6EA0A0G2JKS1 128 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 EMC8O43402 210 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 ITM2AO43736 263 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 RECKO95980 971 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 FEN1P39748 380 aaKnown RBP8.13□□□□□ -1.11
U2AF1-212ENST00000496462 MAGEA8P43361 318 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 HTR6P50406 440 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 MAT1AQ00266 395 aaKnown RBP8.13□□□□□ -1.11
U2AF1-212ENST00000496462 HSPB3Q12988 150 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 NKG7Q16617 165 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 OGFOD2Q6N063 350 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 VN1R4Q7Z5H5 301 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 COX18Q8N8Q8 333 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 ZNF527Q8NB42 609 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 WDR20Q8TBZ3 569 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 ERP27Q96DN0 273 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 SLC45A3Q96JT2 553 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 CCT8L2Q96SF2 557 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 CCDC167Q9P0B6 97 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 U3KQA8 63 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
U2AF1-212ENST00000496462 CEP192Q8TEP8 1941 aa8.13□□□□□ -1.11
U2AF1-212ENST00000496462 C1QTNF9BB2RNN3 333 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ACOT7O00154 380 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 DPM1O60762 260 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 C1QTNF9P0C862 333 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 TRPC1P48995 793 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CASP6P55212 293 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 RHDQ02161 417 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 VAC14Q08AM6 782 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 EID3Q8N140 333 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ZNF614Q8N883 585 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 TMCO6Q96DC7 493 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SPDL1Q96EA4 605 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 OTUB1Q96FW1 271 aaPredicted RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 WDR55Q9H6Y2 383 aaPredicted RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ARGFXA6NJG6 315 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 A8MVJ9 347 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SNNO75324 88 aaPredicted RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ERN1O75460 977 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 NR2F1P10589 423 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CPMP14384 443 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 PLGLB1Q02325 96 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 AGAP7PQ5VUJ5 663 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 DND1Q8IYX4 353 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CPSF7Q8N684 471 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 TEX19Q8NA77 164 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 PLPP5Q8NEB5 264 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 RP9Q8TA86 221 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SLC9A6Q92581 669 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 AGAP4Q96P64 663 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 MAPKAP1Q9BPZ7 522 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 UTP23Q9BRU9 249 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 NDEL1Q9GZM8 345 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SLCO1B3Q9NPD5 702 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ACSS1Q9NUB1 689 aaPredicted RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ZNF446Q9NWS9 450 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 HPF1Q9NWY4 346 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SIDT1Q9NXL6 827 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 OR6C76A6NM76 312 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 GTPBP1O00178 669 aaKnown RBP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 MRASO14807 208 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 HPP00738 406 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 GBAP04062 536 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 P04436 131 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CCL11P51671 97 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CXADRP78310 365 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SF3B4Q15427 424 aaKnown RBP eCLIP8.12□□□□□ -1.11
U2AF1-212ENST00000496462 GALNT18Q6P9A2 607 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SHISA6Q6ZSJ9 500 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SH2D5Q6ZV89 423 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CHMP1BQ7LBR1 199 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 GPR155Q7Z3F1 870 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 TMEM178AQ8NBL3 297 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 APIPQ96GX9 242 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 G6PC3Q9BUM1 346 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SLAMF7Q9NQ25 335 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 PTGFRNQ9P2B2 879 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 RPS6KB2Q9UBS0 482 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ZNF451Q9Y4E5 1061 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 PLXND1Q9Y4D7 1925 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 UNC13CQ8NB66 2214 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 SPTA1P02549 2419 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 PLPP1O14494 284 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 AIFM1O95831 613 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 CBX1P83916 185 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 EFR3AQ14156 821 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 MEP1AQ16819 746 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 EPGNQ6UW88 154 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 ANKRD53Q8N9V6 530 aa8.12□□□□□ -1.11
U2AF1-212ENST00000496462 GPR151Q8TDV0 419 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms