RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 CNPPD1Q9BV87 410 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 TEX10Q9NXF1 929 aaPredicted RBP13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 TEX15Q9BXT5 2789 aa13.2□□□□□ -0.3
RPRD1B-206ENST00000495457 A0A1B0GTH9 108 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 PGRMC2O15173 223 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 PDE9AO76083 593 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 SEMA3DO95025 777 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 GPR75O95800 540 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 HERVK_113P63132 956 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ERVK-8P63133 956 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ART3Q13508 389 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 CDSNQ15517 529 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 TTC19Q6DKK2 380 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 LETMD1Q6P1Q0 360 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 DOLPP1Q86YN1 238 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 GSPT2Q8IYD1 628 aaKnown RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ST13P4Q8IZP2 240 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ZNF808Q8N4W9 903 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 FBXL20Q96IG2 436 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ERVK-6Q9BXR3 956 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 MRPL1Q9BYD6 325 aaKnown RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 FARSBQ9NSD9 589 aaKnown RBP13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ZNF225Q9UK10 706 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 PPT2Q9UMR5 302 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
RPRD1B-206ENST00000495457 CENPEQ02224 2701 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 DYRK3O43781 588 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 OR10H2O60403 315 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 KLK1P06870 262 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 PTGS2P35354 604 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 IFT88Q13099 833 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 BIKQ13323 160 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 GGTA1PQ4G0N0 100 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 PIGGQ5H8A4 983 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 OPN5Q6U736 354 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 TIFABQ6ZNK6 161 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 TRMT10CQ7L0Y3 403 aaKnown RBP13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 NUBPLQ8TB37 319 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 TRPC4APQ8TEL6 797 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 C1QTNF3Q9BXJ4 246 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 DEFB127Q9H1M4 99 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 ELOVL6Q9H5J4 265 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
RPRD1B-206ENST00000495457 GOLGA8RI6L899 631 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 PRRG2O14669 202 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 ADAM10O14672 748 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 NADKO95544 446 aaPredicted RBP13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 OTCP00480 354 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 PDYNP01213 254 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 CLPSP04118 112 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 CCL3P10147 92 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 PRF1P14222 555 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 DNASE1L1P49184 302 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 PPIAP62937 165 aaKnown RBP13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 PLGLB1Q02325 96 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 SLC29A2Q14542 456 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 OR52E8Q6IFG1 317 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 RIT1Q92963 219 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 ART5Q96L15 291 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 GAL3ST4Q96RP7 486 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 HBEGFQ99075 208 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 TTTY12Q9BZ98 90 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 WDR41Q9HAD4 459 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 HRH3Q9Y5N1 445 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
RPRD1B-206ENST00000495457 IQANK1A0A1B0GTG1 560 aa13.16□□□□□ -0.3
RPRD1B-206ENST00000495457 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms