RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SORT1Q99523 831 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 SMAD5Q99717 465 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 C20orf27Q9GZN8 174 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 C5AR2Q9P296 337 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 COPS7AQ9UBW8 275 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 CCL27Q9Y4X3 112 aa11.3□□□□□ -0.6
CSNK1E-213ENST00000495232 CHD6Q8TD26 2715 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ATP6AP2A0A1C7CYW4 349 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 WASHC1A8K0Z3 465 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 SLCO1B7G3V0H7 640 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 KLF11O14901 512 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 DPM1O60762 260 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 PEX11AO75192 247 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 SNNO75324 88 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ATP6AP2O75787 350 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 CELA2AP08217 269 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC35E2P0CK97 266 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 KITP10721 976 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 PORP16435 677 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 CLCN2P51788 898 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 XKP51811 444 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 MAD2L1Q13257 205 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 RFTN2Q52LD8 501 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ABHD17BQ5VST6 288 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 LINC00696Q6ZRV3 163 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 CRLF3Q8IUI8 442 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 SAMD14Q8IZD0 417 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ZADH2Q8N4Q0 377 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 TEX19Q8NA77 164 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 FNDC5Q8NAU1 212 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 MORN4Q8NDC4 146 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 RIT1Q92963 219 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 C11orf24Q96F05 449 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 PPP1R36Q96LQ0 422 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF354BQ96LW1 612 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 OR8D2Q9GZM6 311 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ZNF552Q9H707 407 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ABI3Q9P2A4 366 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 ENTPD4Q9Y227 616 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 EIF3LQ9Y262 564 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
CSNK1E-213ENST00000495232 TRBV11-1A0A0K0K1C0 115 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 DYTNA2CJ06 578 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 VPS4BO75351 444 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 CSNK2A2P19784 350 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 NT5EP21589 574 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 FEN1P39748 380 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 ASMTP46597 345 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 MEP1AQ16819 746 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 MMP21Q8N119 569 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 ARFGAP2Q8N6H7 521 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 NFAM1Q8NET5 270 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 OR1N1Q8NGS0 311 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 ELP5Q8TE02 316 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 UCN3Q969E3 161 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 NCLNQ969V3 563 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 EXOSC8Q96B26 276 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 C3orf30Q96M34 536 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 BBC3Q96PG8 261 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 LMF1Q96S06 567 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 NUF2Q9BZD4 464 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 MYNNQ9NPC7 610 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 STMN3Q9NZ72 180 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 EHD3Q9NZN3 535 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 MARCOQ9UEW3 520 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 CES1P1Q9UKY3 287 aa11.28□□□□□ -0.6
CSNK1E-213ENST00000495232 DOCK10Q96BY6 2186 aa11.27□□□□□ -0.6
CSNK1E-213ENST00000495232 FAM208BQ5VWN6 2430 aa11.27□□□□□ -0.6
CSNK1E-213ENST00000495232 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 TRPC5OSA6NMA1 111 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 K7EM74 188 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 HDAC3O15379 428 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 ZFAND5O76080 213 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 PRPS2P11908 318 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 CPMP14384 443 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 DDCP20711 480 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 GALNSP34059 522 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 HK2P52789 917 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 ARG2P78540 354 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 KLRB1Q12918 225 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms