RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	DNAJC17	Q9NVM6	304 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	BARHL2	Q9NY43	387 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CYP39A1	Q9NYL5	469 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RBAK	Q9NYW8	714 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ANKMY1	Q9P2S6	941 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRPC4	Q9UBN4	977 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	NDRG3	Q9UGV2	375 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLCO3A1	Q9UIG8	710 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RAB23	Q9ULC3	237 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRELID3B	Q9Y3B1	194 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	AP4B1	Q9Y6B7	739 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RNF215	Q9Y6U7	377 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	MN1	Q10571	1320 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	MAP3K15	Q6ZN16	1313 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	AK9	Q5TCS8	1911 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PARD3	Q8TEW0	1356 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TNR	Q92752	1358 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CAMSAP2	Q08AD1	1489 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RUSC2	Q8N2Y8	1516 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ESYT2	A0FGR8	921 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CPED1	A4D0V7	1026 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ARHGEF35	A5YM69	484 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	HSPA12A	O43301	675 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	XPNPEP2	O43895	674 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GMDS	O60547	372 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MITF	O75030	526 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ATP2C2	O75185	946 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RSL1D1	O76021	490 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	KCNK5	O95279	499 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CLDN14	O95500	239 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SERPINA5	P05154	406 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MMP2	P08253	660 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GSTA1	P08263	222 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	UQCRFS1P1	P0C7P4	283 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SAG	P10523	405 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD72	P21854	359 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	WARS	P23381	471 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CXCR2	P25025	360 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RORA	P35398	523 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC1A3	P43003	542 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDK9	P50750	372 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CAPZA1	P52907	286 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RAD23B	P54727	409 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	NAGLU	P54802	743 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRMT2	P55345	433 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TAS2R60	P59551	318 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ELF3	P78545	371 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SPIB	Q01892	262 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PEX6	Q13608	980 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PTK6	Q13882	451 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RBM39	Q14498	530 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	EMC2	Q15006	297 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GSTA3	Q16772	222 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MEP1B	Q16820	701 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRIM16L	Q309B1	348 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	HSDL1	Q3SXM5	330 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MOGAT2	Q3SYC2	334 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	KLHL12	Q53G59	568 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ERMARD	Q5T6L9	678 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ARMC12	Q5T9G4	340 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZDHHC20	Q5W0Z9	365 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	C18orf63	Q68DL7	685 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RAET1G	Q6H3X3	334 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TCEAL6	Q6IPX3	200 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TTI2	Q6NXR4	508 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RFWD3	Q6PCD5	774 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	BHLHB9	Q6PI77	547 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	LRRC8D	Q7L1W4	858 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SMIM15	Q7Z3B0	74 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	NET1	Q7Z628	596 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZC3HC1	Q86WB0	502 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RALGPS2	Q86X27	583 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MISP	Q8IVT2	679 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GID4	Q8IVV7	300 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ADGRF2	Q8IZF7	708 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	SCML4	Q8N228	414 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF786	Q8N393	782 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GPR137C	Q8N3F9	429 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ALLC	Q8N6M5	410 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	POMGNT2	Q8NAT1	580 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	C19orf18	Q8NEA5	215 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR52J3	Q8NH60	311 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PSMA8	Q8TAA3	256 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GRPEL2	Q8TAA5	225 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GDPD5	Q8WTR4	605 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	KCNE4	Q8WWG9	221 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PSPC1	Q8WXF1	523 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	YIPF5	Q969M3	257 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TAMM41	Q96BW9	452 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	MTERF3	Q96E29	417 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	DUS3L	Q96G46	650 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PDXP	Q96GD0	296 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	LURAP1	Q96LR2	239 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	FER1L6-AS2	Q96M78	137 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF285	Q96NJ3	590 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAL3ST4	Q96RP7	486 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CYP2S1	Q96SQ9	504 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	NEURL2	Q9BR09	285 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms