RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SLCO1A2P46721 670 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 GPR85P60893 370 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 PAGE2Q7Z2X7 111 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 SIAH3Q8IW03 269 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 ST13P4Q8IZP2 240 aaPredicted RBP30.81■■■□□ 2.52
CBX4-203ENST00000494546 CNPY4Q8N129 248 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 MYRIPQ8NFW9 859 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 PELOQ9BRX2 385 aaKnown RBP30.81■■■□□ 2.52
CBX4-203ENST00000494546 CNPPD1Q9BV87 410 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 TEX10Q9NXF1 929 aaPredicted RBP30.81■■■□□ 2.52
CBX4-203ENST00000494546 ZNF225Q9UK10 706 aa30.81■■■□□ 2.52
CBX4-203ENST00000494546 A0A1W2PPM1 405 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 HRKO00198 91 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 SLC19A2O60779 497 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 ZG16O60844 167 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 RFC3P40938 356 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP30.8■■■□□ 2.52
CBX4-203ENST00000494546 CCNYL2Q5T2Q4 361 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 SLC22A9Q8IVM8 553 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 GPALPP1Q8IXQ4 340 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 METTL4Q8N3J2 472 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 CDYL2Q8N8U2 506 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 MAGED4Q96JG8 741 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 ART5Q96L15 291 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 DCDC2Q9UHG0 476 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 ADAM29Q9UKF5 820 aa30.8■■■□□ 2.52
CBX4-203ENST00000494546 SMIM23A6NLE4 172 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 FOXO6A8MYZ6 492 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 ASNA1O43681 348 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 IMPDH1P20839 514 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 OR52E8Q6IFG1 317 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 POGLUT1Q8NBL1 392 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 PSD4Q8NDX1 1056 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 FBXL20Q96IG2 436 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 HBEGFQ99075 208 aa30.79■■■□□ 2.52
CBX4-203ENST00000494546 PGRMC2O15173 223 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 IGKV3-11P04433 115 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 TNFRSF8P28908 595 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 CA7P43166 264 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 PRKAA2P54646 552 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 CASP6P55212 293 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 ERVK-8P63133 956 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 ZNF267Q14586 743 aaPredicted RBP30.78■■■□□ 2.52
CBX4-203ENST00000494546 RASA2Q15283 850 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 TCHHL1Q5QJ38 904 aaPredicted RBP30.78■■■□□ 2.52
CBX4-203ENST00000494546 COMMD6Q7Z4G1 85 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 RIT1Q92963 219 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 ZNF382Q96SR6 550 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 BRF2Q9HAW0 419 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 ERVK-19Q9WJR5 959 aa30.78■■■□□ 2.52
CBX4-203ENST00000494546 CCL21O00585 134 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 TFECO14948 347 aaPredicted RBP30.77■■■□□ 2.52
CBX4-203ENST00000494546 COL8A1P27658 744 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 MAPK12P53778 367 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 ASPHQ12797 758 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 DOPEY1Q5JWR5 2465 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 GPRIN3Q6ZVF9 776 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 C9orf40Q8IXQ3 194 aa30.77■■■□□ 2.52
CBX4-203ENST00000494546 MANBAO00462 879 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 KRT15P19012 456 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 PIK3R1P27986 724 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 HSF1Q00613 529 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 GALNT1Q10472 559 aaPredicted RBP30.76■■■□□ 2.51
CBX4-203ENST00000494546 ZNF750Q32MQ0 723 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 NDUFAF5Q5TEU4 345 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 GHDCQ8N2G8 530 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 NUBPLQ8TB37 319 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 DEPPQ9NTK1 212 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP30.76■■■□□ 2.512e-7■■□□□ 14.3
CBX4-203ENST00000494546 NMRK1Q9NWW6 199 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 SUCOQ9UBS9 1254 aaKnown RBP30.76■■■□□ 2.51
CBX4-203ENST00000494546 CROCCQ5TZA2 2017 aa30.76■■■□□ 2.51
CBX4-203ENST00000494546 A0A1W2PS29 197 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 ZNF354AO60765 605 aaPredicted RBP30.75■■■□□ 2.51
CBX4-203ENST00000494546 GLRA3O75311 464 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 KRT6AP02538 564 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 KRT6BP04259 564 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 SLC35E2P0CK97 266 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 KRT6CP48668 564 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 C3AR1Q16581 482 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 SPRED3Q2MJR0 410 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 OPN5Q6U736 354 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 SPPL2CQ8IUH8 684 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 L3HYPDHQ96EM0 354 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 EMCNQ9ULC0 261 aa30.75■■■□□ 2.51
CBX4-203ENST00000494546 DIDO1Q9BTC0 2240 aaKnown RBP30.74■■■□□ 2.51
CBX4-203ENST00000494546 ZNHIT1O43257 154 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 HMOX2P30519 316 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 TBL3Q12788 808 aaKnown RBP30.74■■■□□ 2.51
CBX4-203ENST00000494546 MPEG1Q2M385 716 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 RNF111Q6ZNA4 994 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 RTL4Q6ZR62 310 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 ZFP62Q8NB50 900 aaPredicted RBP30.74■■■□□ 2.51
CBX4-203ENST00000494546 OR4K14Q8NGD5 310 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 METTL6Q8TCB7 284 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 EPS8L3Q8TE67 593 aaKnown RBP30.74■■■□□ 2.51
CBX4-203ENST00000494546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30.74■■■□□ 2.51
CBX4-203ENST00000494546 GAL3ST4Q96RP7 486 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 ANKZF1Q9H8Y5 726 aa30.74■■■□□ 2.51
CBX4-203ENST00000494546 PPCSQ9HAB8 311 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms