RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MMP21Q8N119 569 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 MORN4Q8NDC4 146 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 BRIX1Q8TDN6 353 aaKnown RBP11.65□□□□□ -0.54
TRA2A-209ENST00000494255 UCN3Q969E3 161 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 KLHL29Q96CT2 875 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 ART5Q96L15 291 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 PPP1R36Q96LQ0 422 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 C3orf30Q96M34 536 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
TRA2A-209ENST00000494255 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
TRA2A-209ENST00000494255 MIEF1Q9NQG6 463 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
TRA2A-209ENST00000494255 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 C5AR2Q9P296 337 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 TEKT2Q9UIF3 430 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 UTS2RQ9UKP6 389 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 ZNF780BQ9Y6R6 833 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 DOCK10Q96BY6 2186 aa11.65□□□□□ -0.54
TRA2A-209ENST00000494255 TRPC5OSA6NMA1 111 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 SLCO1B7G3V0H7 640 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 VPS4BO75351 444 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 SLC35E2P0CK97 266 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 KITP10721 976 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 PORP16435 677 aaPredicted RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 CLCN2P51788 898 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 XKP51811 444 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 RFTN2Q52LD8 501 aaPredicted RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 CRB2Q5IJ48 1285 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 ISLR2Q6UXK2 745 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 HPS6Q86YV9 775 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 CRLF3Q8IUI8 442 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 MGAQ8IWI9 3026 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 SAMD14Q8IZD0 417 aaPredicted RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 SLC5A8Q8N695 610 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 ARFGAP2Q8N6H7 521 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 FNDC5Q8NAU1 212 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 PTPMT1Q8WUK0 201 aaPredicted RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 TM9SF4Q92544 642 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 NCLNQ969V3 563 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 PPWD1Q96BP3 646 aaKnown RBP11.65□□□□□ -0.55
TRA2A-209ENST00000494255 VMP1Q96GC9 406 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 FCRL1Q96LA6 429 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 OR8D2Q9GZM6 311 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 EPS8L2Q9H6S3 715 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 EHD3Q9NZN3 535 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 PTGFRNQ9P2B2 879 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 HEY2Q9UBP5 337 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 GIMAP2Q9UG22 337 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 CES1P1Q9UKY3 287 aa11.65□□□□□ -0.55
TRA2A-209ENST00000494255 A8MUI8 341 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 HDAC3O15379 428 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 DPM1O60762 260 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 JUNP05412 331 aaKnown RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 CPMP14384 443 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 SDC1P18827 310 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 CSNK2A2P19784 350 aaPredicted RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 DDCP20711 480 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 ASMTP46597 345 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 HK2P52789 917 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 SMU1Q2TAY7 513 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 C6orf136Q5SQH8 315 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 ABHD17BQ5VST6 288 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 FAM71E1Q6IPT2 247 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 ELP5Q8TE02 316 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 EXOSC8Q96B26 276 aaKnown RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 TSSK3Q96PN8 268 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 DEFB126Q9BYW3 111 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 NUF2Q9BZD4 464 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 MARCOQ9UEW3 520 aaPredicted RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 PPIEQ9UNP9 301 aaKnown RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 ENTPD4Q9Y227 616 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 EIF3LQ9Y262 564 aaKnown RBP11.64□□□□□ -0.55
TRA2A-209ENST00000494255 CROCCQ5TZA2 2017 aa11.64□□□□□ -0.55
TRA2A-209ENST00000494255 TNRC6AQ8NDV7 1962 aaKnown RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 TRBV11-1A0A0K0K1C0 115 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 DDAH2O95865 285 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 PRPS2P11908 318 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 BCKDHAP12694 445 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 GALNSP34059 522 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 SOX11P35716 441 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 FEN1P39748 380 aaKnown RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 MFAP5Q13361 173 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF267Q14586 743 aaPredicted RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 LRRC25Q8N386 305 aaPredicted RBP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 KIF2BQ8N4N8 673 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 ZADH2Q8N4Q0 377 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRA2A-209ENST00000494255 SLC2A12Q8TD20 617 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 CKAP2Q8WWK9 683 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 PSMF1Q92530 271 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 RIT1Q92963 219 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF354BQ96LW1 612 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 MAGEB18Q96M61 343 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 C7orf26Q96N11 449 aa11.63□□□□□ -0.55
TRA2A-209ENST00000494255 BBC3Q96PG8 261 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms