RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 FAM9CQ8IZT9 166 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 OR4K14Q8NGD5 310 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 OR9I1Q8NGQ6 314 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 OR2Y1Q8NGV0 311 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 DNAJB14Q8TBM8 379 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 BCAS4Q8TDM0 211 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 TEX37Q96LM6 180 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 ZBTB18Q99592 522 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 GPR87Q9BY21 358 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 BRINP2Q9C0B6 783 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 PRDM9Q9NQV7 894 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 KCND3Q9UK17 655 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.17
LIME1-208ENST00000493265 ARL2BPQ9Y2Y0 163 aa16.14■□□□□ 0.17
LIME1-208ENST00000493265 A0A1W2PS29 197 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 GABRR3A8MPY1 467 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 A8MUA0 341 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 TGFBR3LH3BV60 316 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 TERTO14746 1132 aaKnown RBP16.13■□□□□ 0.17
LIME1-208ENST00000493265 SLC22A3O75751 556 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 RECKO95980 971 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 UMODP07911 640 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
LIME1-208ENST00000493265 GPX3P22352 226 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 PTGER1P34995 402 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 FEN1P39748 380 aaKnown RBP16.13■□□□□ 0.17
LIME1-208ENST00000493265 UCNP55089 124 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 HSD17B7P56937 341 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 RHDQ02161 417 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 SQLEQ14534 574 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 UGT8Q16880 541 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 AGKQ53H12 422 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 ZNF385BQ569K4 471 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 METTL21CQ5VZV1 264 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 QSOX2Q6ZRP7 698 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 LANCL3Q6ZV70 420 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 R3HCC1LQ7Z5L2 792 aaKnown RBP16.13■□□□□ 0.17
LIME1-208ENST00000493265 DOK4Q8TEW6 326 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 METTL21AQ8WXB1 218 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 ANKRD9Q96BM1 317 aaPredicted RBP16.13■□□□□ 0.17
LIME1-208ENST00000493265 MESP1Q9BRJ9 268 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 ALOXE3Q9BYJ1 711 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 GIMAP4Q9NUV9 329 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 CES1P1Q9UKY3 287 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 PSME2Q9UL46 239 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 ENTPD4Q9Y227 616 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 MMACHCQ9Y4U1 282 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 ZNF780BQ9Y6R6 833 aa16.13■□□□□ 0.17
LIME1-208ENST00000493265 COL6A6A6NMZ7 2263 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 BLACEA4D250 179 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 J3QKU1 62 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 FCHO1O14526 889 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 ANKRD28O15084 1053 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 ALOX12BO75342 701 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 GPR75O95800 540 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 IFNA16P05015 189 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 LAMP1P11279 417 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 IL12AP29459 219 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 PPP2R1BP30154 601 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 XKP51811 444 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CLNS1AP54105 237 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 EEF1A2Q05639 463 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 LY6DQ14210 128 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CPTPQ5TA50 214 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 MTDHQ86UE4 582 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 SCUBE1Q8IWY4 988 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 RIMKLAQ8IXN7 391 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CCDC197Q8NCU1 140 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CIDECQ96AQ7 238 aaPredicted RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 PPWD1Q96BP3 646 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 C8orf44Q96CB5 159 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 BBS4Q96RK4 519 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 PRPF18Q99633 342 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 SEMA4CQ9C0C4 833 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 NMUR2Q9GZQ4 415 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 SDR39U1Q9NRG7 319 aaPredicted RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 PNO1Q9NRX1 252 aaKnown RBP16.12■□□□□ 0.17
LIME1-208ENST00000493265 ZIM2Q9NZV7 527 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 ARMCX1Q9P291 453 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 CCDC88CQ9P219 2028 aa16.12■□□□□ 0.17
LIME1-208ENST00000493265 IGHV3-20A0A0C4DH32 117 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 NR5A2O00482 541 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 OR10H2O60403 315 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 RPL3P39023 403 aaKnown RBP16.11■□□□□ 0.17
LIME1-208ENST00000493265 DGKQP52824 942 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 OR4D2P58180 307 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 IL10RAQ13651 578 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 FAM174BQ3ZCQ3 159 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 OR4F3Q6IEY1 312 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 PLPP5Q8NEB5 264 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 STARD8Q92502 1023 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 MTERF3Q96E29 417 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 SLC35C2Q9NQQ7 365 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 SEMA3GQ9NS98 782 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 EHD3Q9NZN3 535 aa16.11■□□□□ 0.17
LIME1-208ENST00000493265 PYCARD-AS1I3L0S3 204 aa16.1■□□□□ 0.17
LIME1-208ENST00000493265 PDPK1O15530 556 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms