RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SUSD1Q6UWL2 747 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SLC44A3Q8N4M1 653 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 OR52B6Q8NGF0 335 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 UPF1Q92900 1129 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS8-225ENST00000492449 ORAI1Q96D31 301 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 ZDHHC12Q96GR4 267 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 TCEAL7Q9BRU2 100 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 HDHD2Q9H0R4 259 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4Q9UBX2 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 CRYL1Q9Y2S2 319 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SNX11Q9Y5W9 270 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DSPPQ9NZW4 1301 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SCN1AP35498 2009 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MCRIP1C9JLW8 97 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 M0R129 80 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MATN3O15232 486 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LANCL1O43813 399 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC28A2O43868 658 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ENTPD6O75354 484 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SOD1P00441 154 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TFPIP10646 304 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 POU3F2P20265 443 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 OGNP20774 298 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 GABRA5P31644 462 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SELENOPP49908 381 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MC2RQ01718 297 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 RBBP4Q09028 425 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC14A1Q13336 389 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 UBXN2BQ14CS0 331 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 USP39Q53GS9 565 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 EEF1DP3Q658K8 133 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 EFCAB12Q6NXP0 572 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 DOK6Q6PKX4 331 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 BTN2A1Q7KYR7 527 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LDB1Q86U70 411 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 CNOT9Q92600 299 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 ELP4Q96EB1 424 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ZNF285Q96NJ3 590 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 DMRTA2Q96SC8 542 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 C7orf50Q9BRJ6 194 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC25A32Q9H2D1 315 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 METTL17Q9H7H0 456 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 BRD9Q9H8M2 597 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 CYSLTR2Q9NS75 346 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 RPL36Q9Y3U8 105 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 BACE2Q9Y5Z0 518 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TRDV1A0A1B0GX56 115 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ARGFXA6NJG6 315 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 RP2O75695 350 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 AQP8O94778 261 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 GABRA1P14867 456 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 PPP3CBP16298 524 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 RBMS1P29558 406 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 AVPR1BP47901 424 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LIMS1P48059 325 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 DEFA5Q01523 94 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SERTAD2Q14140 314 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 PCBP2Q15366 365 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC36A2Q495M3 483 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 CCDC157Q569K6 752 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC6A19Q695T7 634 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 RAET1GQ6H3X3 334 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 OR7E24Q6IFN5 339 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 PDE12Q6L8Q7 609 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 PRICKLE2Q7Z3G6 844 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 TMEM17Q86X19 198 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LGI4Q8N135 537 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SYNPOQ8N3V7 929 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SPICQ8N5J4 248 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 KRTCAP2Q8N6L1 136 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 OR6P1Q8NGX9 317 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 INPP5KQ9BT40 448 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 SAP130Q9H0E3 1048 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 C11orf16Q9NQ32 467 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 OSER1Q9NX31 292 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 NDUFAF4Q9P032 175 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MIOXQ9UGB7 285 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 EIF2B4Q9UI10 523 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 CHST2Q9Y4C5 530 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 LOC105369274A0A096LPK9 316 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 C2orf74A8MZ97 194 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 UBE2CO00762 179 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 GALR3O60755 368 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 PEX14O75381 377 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ATG12O94817 140 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 FOLR2P14207 255 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 NFYAP23511 347 aaPredicted RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 ATP5A1P25705 553 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 SLC6A4P31645 630 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 ARSDP51689 593 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 CRYBA2P53672 197 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 MAZP56270 477 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 FKBP1AP62942 108 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 ERVK-25P63136 954 aa9.24□□□□□ -0.93
VPS8-225ENST00000492449 EEF1A1P68104 462 aaKnown RBP9.24□□□□□ -0.93
VPS8-225ENST00000492449 EEF1A2Q05639 463 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms