RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM47BQ8NA70 645 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 OR5M3Q8NGP4 307 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 STAG3L4Q8TBR4 150 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 SLC2A12Q8TD20 617 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF473Q8WTR7 871 aaKnown RBP8.45□□□□□ -1.06
HDAC3-212ENST00000492407 TANKQ92844 425 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 NINJ1Q92982 152 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 CMTM7Q96FZ5 175 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 RBM18Q96H35 190 aaKnown RBP8.45□□□□□ -1.06
HDAC3-212ENST00000492407 CAPZA3Q96KX2 299 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 GPR22Q99680 433 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 CPNE1Q99829 537 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF559Q9BR84 538 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 PELOQ9BRX2 385 aaKnown RBP8.45□□□□□ -1.06
HDAC3-212ENST00000492407 CD244Q9BZW8 370 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 MMADHCQ9H3L0 296 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-212ENST00000492407 ACKR4Q9NPB9 350 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 NPDC1Q9NQX5 325 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF446Q9NWS9 450 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 WWOXQ9NZC7 414 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 CNIH4Q9P003 139 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 TXNDC16Q9P2K2 825 aa8.45□□□□□ -1.06
HDAC3-212ENST00000492407 SCN3AQ9NY46 2000 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PINLYPA6NC86 204 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 EFCAB8A8MWE9 144 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 NPIPA2E9PIF3 369 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 NPIPA3F8WFD2 350 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 WWP2O00308 870 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZNHIT1O43257 154 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PRAMEF4O60810 478 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PDE9AO76083 593 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CCDC166P0CW27 439 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 GLI4P10075 376 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PYGBP11216 843 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CERS1P27544 350 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 TLX1P31314 330 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 GP5P40197 560 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PAFAH1B1P43034 410 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 MAN2A2P49641 1150 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 TUBA1BP68363 451 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF460Q14592 562 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SF3B4Q15427 424 aaKnown RBP eCLIP8.44□□□□□ -1.064e-7■■■■■ 35.9
HDAC3-212ENST00000492407 ZNF791Q3KP31 576 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 WLSQ5T9L3 541 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 RIPPLY2Q5TAB7 128 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 DEPDC1Q5TB30 811 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PRAMEF9Q5VWM5 478 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SLC22A10Q63ZE4 541 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 METTL2BQ6P1Q9 378 aaKnown RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 MED27Q6P2C8 311 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 FAM47EQ6ZV65 393 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 UBE3DQ7Z6J8 389 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CLNKQ7Z7G1 428 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 KLHL7Q8IXQ5 586 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZBED8Q8IZ13 594 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZCCHC7Q8N3Z6 543 aaKnown RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SNX31Q8N9S9 440 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SLC22A8Q8TCC7 542 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PAQR8Q8TEZ7 354 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF721Q8TF20 911 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PYROXD1Q8WU10 500 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF75CPQ92670 426 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 ANKRD9Q96BM1 317 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SENP5Q96HI0 755 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PWWP2AQ96N64 755 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 F2RL3Q96RI0 385 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CSF3RQ99062 836 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 RBBP8Q99708 897 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CENPKQ9BS16 269 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 MS4A8Q9BY19 250 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 OR8D2Q9GZM6 311 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 MRPL46Q9H2W6 279 aaKnown RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SH2D2AQ9NP31 389 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 NUDT4Q9NZJ9 180 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CD274Q9NZQ7 290 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 TBK1Q9UHD2 729 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 PHF11Q9UIL8 331 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 MTO1Q9Y2Z2 717 aaKnown RBP8.44□□□□□ -1.06
HDAC3-212ENST00000492407 SAR1BQ9Y6B6 198 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 F8P00451 2351 aa8.44□□□□□ -1.06
HDAC3-212ENST00000492407 CCDC168Q8NDH2 2452 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 A0A0G2JN53 185 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 NKX2-6A6NCS4 301 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 NCF1BA6NI72 391 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FAM159BA6NKW6 160 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 OR6C76A6NM76 312 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 HSPB2A8KAH6 182 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 FAM166BA8MTA8 275 aa8.43□□□□□ -1.06
HDAC3-212ENST00000492407 NCF1CA8MVU1 366 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms