RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ZNF721Q8TF20 911 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 CCT6BQ92526 530 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 SERINC2Q96SA4 455 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 SLC6A15Q9H2J7 730 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 ZFP64Q9NPA5 681 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 ACKR4Q9NPB9 350 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 TENM1Q9UKZ4 2725 aa10.73□□□□□ -0.69
CACNA1C-228ENST00000492150 RYR3Q15413 4870 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 A0A088AWK7 358 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 LDB3O75112 727 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 H2AFYO75367 372 aaKnown RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 CLEC3AO75596 197 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 EPPINO95925 133 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 TNNI3P19429 210 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF10P21506 573 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 GDF5P43026 501 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 SLC6A12P48065 614 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 TRPC1P48995 793 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 MTTPP55157 894 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 DEFA6Q01524 100 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 STX4Q12846 297 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 EFTUD2Q15029 972 aaKnown RBP eCLIP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 ACSF3Q4G176 576 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 TEDDM1Q5T9Z0 273 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 SLC22A10Q63ZE4 541 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 ADNP2Q6IQ32 1131 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 IGDCC3Q8IVU1 814 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 MAGOHBQ96A72 148 aaKnown RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 LCORQ96JN0 433 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 REXO4Q9GZR2 422 aaKnown RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 RBSNQ9H1K0 784 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 NT5DC2Q9H857 520 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 PLAC1Q9HBJ0 212 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 PRDM7Q9NQW5 492 aa10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF629Q9UEG4 869 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-228ENST00000492150 NPEPPSL1A6NEC2 478 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 AHRRA9YTQ3 701 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 PRAMEF4O60810 478 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 TMCC2O75069 709 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 IGKV3-11P04433 115 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 FREM3P0C091 2139 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 GNAZP19086 355 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 GSTM2P28161 218 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 TIMP3P35625 211 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF136P52737 540 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 KCNJ2P63252 427 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 CDKL1Q00532 357 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ID2Q02363 134 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 SERTAD2Q14140 314 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 SPANXN3Q5MJ09 141 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 WIPI1Q5MNZ9 446 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 PRAMEF20Q5VT98 475 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 PRAMEF9Q5VWM5 478 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 FAM45BPQ6NSW5 357 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 TRIM40Q6P9F5 258 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF793Q6ZN11 406 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 MAATS1Q7Z4T9 603 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 NINQ8N4C6 2090 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 GABPB2Q8TAK5 448 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 NUBPLQ8TB37 319 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 FAM45AQ8TCE6 357 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 IGFBPL1Q8WX77 278 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 KIAA1191Q96A73 305 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ANKRD9Q96BM1 317 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 F2RL3Q96RI0 385 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 EGFL8Q99944 293 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 MAPKAP1Q9BPZ7 522 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 BEX2Q9BXY8 128 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 KIAA1549Q9HCM3 1950 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF701Q9NV72 531 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 QPCTLQ9NXS2 382 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ARMCX1Q9P291 453 aa10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 ZNF490Q9ULM2 529 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 BOKQ9UMX3 212 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-228ENST00000492150 HEATR5AQ86XA9 2040 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 ANKDD1BA6NHY2 528 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 HRKO00198 91 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 WDR47O94967 919 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 LRATO95237 230 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 TTC4O95801 387 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 ZNF37AP17032 561 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 HNMTP50135 292 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 IGLV3-21P80748 117 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 CRYZQ08257 329 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 DUSP8Q13202 625 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 RCN2Q14257 317 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 RNASEH2BQ5TBB1 312 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 LIPNQ5VXI9 398 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 CCDC137Q6PK04 289 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 DGAT2L6Q6ZPD8 337 aa10.7□□□□□ -0.7
CACNA1C-228ENST00000492150 LACC1Q8IV20 430 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms