RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ATP5A1P25705 553 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 DCTP40126 519 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SLC1A6P48664 564 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 HLCSP50747 726 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TAS2R50P59544 299 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ABCE1P61221 599 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 OC90Q02509 493 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TRAF3Q13114 568 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SLC13A2Q13183 592 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 DDX39BQ13838 428 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TERF2Q15554 542 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SGO1Q5FBB7 561 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ARL13AQ5H913 290 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 GALNTL5Q7Z4T8 443 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 FJX1Q86VR8 437 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF595Q8IYB9 648 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 CDYL2Q8N8U2 506 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 ACOT4Q8N9L9 421 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 L3MBTL4Q8NA19 623 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 RAB3IL1Q8TBN0 382 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 METTL6Q8TCB7 284 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 LRRC8CQ8TDW0 803 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 THAP3Q8WTV1 239 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 NCLNQ969V3 563 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 MTFMTQ96DP5 389 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TSPAN10Q9H1Z9 355 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 LRFN1Q9P244 771 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SEC14L3Q9UDX4 400 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 TRPS1Q9UHF7 1281 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 SNX6Q9UNH7 406 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 FIS1Q9Y3D6 152 aa11.82□□□□□ -0.52
SEC61A1-206ENST00000491668 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 SAP18O00422 153 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 NME2P1O60361 137 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 CTNSO60931 367 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 SLC25A12O75746 678 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 CHEK2O96017 543 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 TGFB1P01137 390 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 KRT6AP02538 564 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 KRT6BP04259 564 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 CD46P15529 392 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 NME2P22392 152 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 HIST1H1TP22492 207 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 SERPINB1P30740 379 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 KRT6CP48668 564 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 TMEM35AQ53FP2 167 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 KHDRBS2Q5VWX1 349 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 SLC25A25Q6KCM7 469 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 LETMD1Q6P1Q0 360 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF321PQ8N8H1 164 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 AGAP11Q8TF27 550 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 PTPMT1Q8WUK0 201 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF75CPQ92670 426 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ANKRD9Q96BM1 317 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 KCNC2Q96PR1 638 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 TBCDQ9BTW9 1192 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF717Q9BY31 904 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 DEFB126Q9BYW3 111 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 OR51B5Q9H339 312 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 LIN28AQ9H9Z2 209 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 LYRM4Q9HD34 91 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 ADGRE2Q9UHX3 823 aa11.81□□□□□ -0.52
SEC61A1-206ENST00000491668 CSMD1Q96PZ7 3565 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 A0A088AWK7 358 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 A0A1B0GUH1 482 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 H0YIV9 168 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CLDN4O14493 209 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 UBFD1O14562 309 aaKnown RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 LDB3O75112 727 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CHRNGP07510 517 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 ZNF10P21506 573 aaPredicted RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CYB561P49447 251 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CLCN2P51788 898 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 ID2Q02363 134 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 GALNT1Q10472 559 aaPredicted RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 BST1Q10588 318 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 ELAVL1Q15717 326 aaKnown RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 GGTA1PQ4G0N0 100 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 SH2D4BQ5SQS7 431 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 C10orf62Q5T681 223 aaPredicted RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 DEPDC1Q5TB30 811 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 FRG2Q64ET8 278 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 MDGA2Q7Z553 956 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 FGD2Q7Z6J4 655 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 HOMEZQ8IX15 550 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CPSF7Q8N684 471 aaKnown RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 HUS1BQ8NHY5 278 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 ADAMTS18Q8TE60 1221 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 SELENOMQ8WWX9 145 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 VMP1Q96GC9 406 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 GPR137Q96N19 417 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 FRG2BQ96QU4 278 aa11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 MTERF1Q99551 399 aaKnown RBP11.8□□□□□ -0.52
SEC61A1-206ENST00000491668 CENPKQ9BS16 269 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms