RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CA5BP1Q8WTZ4 195 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 PHF10Q8WUB8 498 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ITLN2Q8WWU7 325 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ANKRD9Q96BM1 317 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 MTFMTQ96DP5 389 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 FBXL20Q96IG2 436 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 EXO5Q9H790 373 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ADAM29Q9UKF5 820 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 RNF11Q9Y3C5 154 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 MYOCOSA0A1B0GUC4 107 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 GOLGA6L10A6NI86 522 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 TGFBR3LH3BV60 316 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 TP53I11O14683 189 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 HS6ST1O60243 411 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 OR6B1O95007 311 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 SIX3O95343 332 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 CLDN14O95500 239 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 GALNSP34059 522 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 SOX3P41225 446 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 TMED10P49755 219 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 NRG3P56975 720 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC29A2Q14542 456 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 CCNYL2Q5T2Q4 361 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC22A10Q63ZE4 541 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 MDGA2Q7Z553 956 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 HOMEZQ8IX15 550 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 OR4K14Q8NGD5 310 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 UHMK1Q8TAS1 419 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM57AQ8TBR7 257 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 FAIM2Q9BWQ8 316 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 C1QTNF3Q9BXJ4 246 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 TP63Q9H3D4 680 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 LDAHQ9H6V9 325 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 B4GALT7Q9UBV7 327 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF223Q9UK11 482 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 ATG4BQ9Y4P1 393 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 MAST4O15021 2626 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 ICE1Q9Y2F5 2266 aa15.36■□□□□ 0.05
PDLIM2-217ENST00000491330 CPAMD8Q8IZJ3 1885 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 A0A1B0GTH9 108 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 KRT6AP02538 564 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 KRT6BP04259 564 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC35E2P0CK97 266 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 KRT15P19012 456 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 PTGER4P35408 488 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 KRT6CP48668 564 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 NEK2P51955 445 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 MAPK12P53778 367 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 IGLV3-21P80748 117 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 ASPHQ12797 758 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF630Q2M218 657 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 GGTA1PQ4G0N0 100 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 PIGGQ5H8A4 983 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 TDRPQ86YL5 185 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 OR2M7Q8NG81 312 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 WDR20Q8TBZ3 569 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF721Q8TF20 911 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 ASB5Q8WWX0 329 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 SELENOMQ8WWX9 145 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 PPWD1Q96BP3 646 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 GAL3ST4Q96RP7 486 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 SORBS1Q9BX66 1292 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 LIN28AQ9H9Z2 209 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 IL1RL2Q9HB29 575 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 SEMA4BQ9NPR2 832 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 CNIH4Q9P003 139 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 PCTPQ9UKL6 214 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 BOKQ9UMX3 212 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 CFL2Q9Y281 166 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 CLDN16Q9Y5I7 305 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 DOPEY1Q5JWR5 2465 aa15.35■□□□□ 0.05
PDLIM2-217ENST00000491330 NAV2Q8IVL1 2488 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 OR14I1A6ND48 311 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM47E-STBD1D6RA91 191 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 BCKDKO14874 412 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ETHE1O95571 254 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 BSGP35613 385 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 RFC3P40938 356 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 HERVK_113P63132 956 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ERVK-8P63133 956 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 KCNJ2P63252 427 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC10A1Q14973 349 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 SPRED3Q2MJR0 410 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 SGO1Q5FBB7 561 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 TBCELQ5QJ74 424 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 C18orf63Q68DL7 685 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ACAD11Q709F0 780 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF227Q86WZ6 799 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 DOLPP1Q86YN1 238 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC22A9Q8IVM8 553 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 GALNT12Q8IXK2 581 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 PLD6Q8N2A8 252 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM109AQ8N4B1 249 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 TRPC4APQ8TEL6 797 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 CCDC126Q96EE4 140 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 CDK15Q96Q40 435 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ERVK-6Q9BXR3 956 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 DEFB127Q9H1M4 99 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 BRF2Q9HAW0 419 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 DCDC2Q9UHG0 476 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms