RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 C1QTNF6Q9BXI9 259 aa9.37□□□□□ -0.91
ERCC3-208ENST00000491292 TTYH1Q9H313 450 aaPredicted RBP9.37□□□□□ -0.91
ERCC3-208ENST00000491292 TAS2R7Q9NYW3 318 aa9.37□□□□□ -0.91
ERCC3-208ENST00000491292 A0A075B6Q4 140 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 A0A0X1KG70 313 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ARHGEF33A8MVX0 844 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 H3BUI4 141 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 COCHO43405 550 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PLATP00750 562 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PROS1P07225 676 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 C8GP07360 202 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 JUPP14923 745 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PTX3P26022 381 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 AOAHP28039 575 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 DGKGP49619 791 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ATP12AP54707 1039 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 CDH11P55287 796 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ARF5P84085 180 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ARHGEF6Q15052 776 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 GARNL3Q5VVW2 1013 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 NCEH1Q6PIU2 408 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TMC8Q8IU68 726 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 CFAP206Q8IYR0 622 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 MMP21Q8N119 569 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ZNF433Q8N7K0 673 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TMEM145Q8NBT3 493 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.36□□□□□ -0.917e-8■■□□□ 12
ERCC3-208ENST00000491292 USP7Q93009 1102 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 SYT17Q9BSW7 474 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 GABARAPL1Q9H0R8 117 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PAK6Q9NQU5 681 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TMEM45AQ9NWC5 275 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 LSM7Q9UK45 103 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 CCL27Q9Y4X3 112 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ASCC3Q8N3C0 2202 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 MTMR11A4FU01 709 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 DRGXA6NNA5 263 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ATP6V1G2-DDX39BF2Z307 99 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 RFPL3O75679 317 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 IL3P08700 152 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 OSMP13725 252 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 SRP9P49458 86 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TSPAN5P62079 268 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PPP3R1P63098 170 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 CCSMST1Q4G0I0 132 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 CDC73Q6P1J9 531 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 LIMS2Q7Z4I7 341 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TOMM5Q8N4H5 51 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 OXR1Q8N573 874 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 LILRA3Q8N6C8 439 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 OR4F15Q8NGB8 312 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 OR2T35Q8NGX2 323 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 TM9SF4Q92544 642 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 BBS4Q96RK4 519 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ZNF607Q96SK3 696 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 DHRS9Q9BPW9 319 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 SLC28A3Q9HAS3 691 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 DIABLOQ9NR28 239 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ACOXLQ9NUZ1 547 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 RBFOX1Q9NWB1 397 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 HCN3Q9P1Z3 774 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 PLAGL1Q9UM63 463 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 MAN2B2Q9Y2E5 1009 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 B8ZZF3 427 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 OR5F1O95221 314 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 SLC16A8O95907 504 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 IFNA7P01567 189 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 LHCGRP22888 699 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 GJA5P36382 358 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ETV5P41161 510 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ETV1P50549 477 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 MAZP56270 477 aaKnown RBP9.36□□□□□ -0.91
ERCC3-208ENST00000491292 HYAL2Q12891 473 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 KRT33BQ14525 404 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 FXNQ16595 210 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 Q6ZVL8 140 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 WDR48Q8TAF3 677 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 EID2BQ96D98 161 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ACER3Q9NUN7 267 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
ERCC3-208ENST00000491292 SH3D21A4FU49 640 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 NPIPB15A6NHN6 443 aaPredicted RBP9.35□□□□□ -0.91
ERCC3-208ENST00000491292 GATBO75879 557 aaKnown RBP9.35□□□□□ -0.91
ERCC3-208ENST00000491292 KLKB1P03952 638 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 MRPL3P09001 348 aaKnown RBP9.35□□□□□ -0.91
ERCC3-208ENST00000491292 GJA1P17302 382 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 NOS3P29474 1203 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 PCGF2P35227 344 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 MLLT3P42568 568 aaPredicted RBP9.35□□□□□ -0.91
ERCC3-208ENST00000491292 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 ALG1LQ6GMV1 187 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
ERCC3-208ENST00000491292 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
ERCC3-208ENST00000491292 FTMTQ8N4E7 242 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms