RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SKP1P63208 163 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 TBL3Q12788 808 aaKnown RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ASPHQ12797 758 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 GAB1Q13480 694 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 TFDP2Q14188 446 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 KCNJ11Q14654 390 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ELAVL1Q15717 326 aaKnown RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 BBS9Q3SYG4 887 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 EIPR1Q53HC9 387 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 PIGGQ5H8A4 983 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CTSL3PQ5NE16 218 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CTAGE6Q86UF2 777 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CA13Q8N1Q1 262 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 TMEM52Q8NDY8 209 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 SEMA6DQ8NFY4 1073 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 OR10G3Q8NGC4 313 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 OR4L1Q8NH43 312 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 UTP15Q8TED0 518 aaKnown RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 PTPMT1Q8WUK0 201 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ZFAND2BQ8WV99 257 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 P3H4Q92791 437 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ABTB1Q969K4 478 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CTHRC1Q96CG8 243 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 PLPPR2Q96GM1 343 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 SMIM10Q96HG1 83 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 MRFAP1L1Q96HT8 127 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF778Q96MU6 729 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 PANX3Q96QZ0 392 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 PANX2Q96RD6 677 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 TTC1Q99614 292 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 FERMT1Q9BQL6 677 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 RHNO1Q9BSD3 238 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 OPN3Q9H1Y3 402 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 C12orf65Q9H3J6 166 aaKnown RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CHODLQ9H9P2 273 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 EML4Q9HC35 981 aaKnown RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 MARCH4Q9P2E8 410 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 TMEM89A2RUT3 159 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 GRID2IPA4D2P6 1211 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PSMD12O00232 456 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 EIF3FO00303 357 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 TMPRSS2O15393 492 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 SSX4O60224 188 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 AVILO75366 819 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 TRAPPC6AO75865 159 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 VENTXO95231 258 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 TGM6O95932 706 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 CGAP01215 116 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 CD8AP01732 235 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 CATP04040 527 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 POU2F1P14859 743 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 RPS3P23396 243 aaKnown RBP eCLIP6.42□□□□□ -1.386e-10■■□□□ 12.4
PDLIM1-203ENST00000490391 ADMP35318 185 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 SKIV2L2P42285 1042 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 HSD17B7P56937 341 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 TBPL1P62380 186 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 EEF1A1P68104 462 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PWP1Q13610 501 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PRPSAP1Q14558 356 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 NFKBIBQ15653 356 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PGGHGQ32M88 737 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 C11orf91Q3C1V1 193 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ACSBG2Q5FVE4 666 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 THEMIS2Q5TEJ8 643 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 EEF1A1P5Q5VTE0 462 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PTRHD1Q6GMV3 140 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 NIPAL1Q6NVV3 410 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ALKBH5Q6P6C2 394 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 LCNL1Q6ZST4 164 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ZAR1Q86SH2 424 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 KIAA1328Q86T90 577 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 C1QL4Q86Z23 238 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PLD6Q8N2A8 252 aaKnown RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 TMEM132CQ8N3T6 1108 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 LRRC17Q8N6Y2 441 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 MORN4Q8NDC4 146 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 RAB3IL1Q8TBN0 382 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 UCN3Q969E3 161 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 C11orf24Q96F05 449 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF597Q96LX8 424 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 JSRP1Q96MG2 331 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ALS2CR12Q96Q35 445 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 DOHHQ9BU89 302 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 PACSIN1Q9BY11 444 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 OR8D2Q9GZM6 311 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 AICDAQ9GZX7 198 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 RHBGQ9H310 441 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 BARX1Q9HBU1 254 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM114A2Q9NRY5 505 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 ELOVL5Q9NYP7 299 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 CNIH4Q9P003 139 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 FETUBQ9UGM5 382 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 LCMT1Q9UIC8 334 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 RIMKLBQ9ULI2 386 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 KCNS2Q9ULS6 477 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 MAPRE3Q9UPY8 281 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 C15orf41Q9Y2V0 281 aa6.42□□□□□ -1.38
PDLIM1-203ENST00000490391 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 EXPH5Q8NEV8 1989 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 hCG_1818297A0A087WSY0 165 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms