RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DPEP3Q9H4B8 488 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 KCNMB3Q9NPA1 279 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 PIGVQ9NUD9 493 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 MGAT4AQ9UM21 535 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 KNSTRNQ9Y448 316 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 TEX264Q9Y6I9 313 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 PCNX3Q9H6A9 2034 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 DHX29Q7Z478 1369 aaKnown RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 ACOD1A6NK06 481 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TLR4O00206 839 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 EEF2KO00418 725 aaKnown RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 CHEK1O14757 476 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TXNL1O43396 289 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 FRAT2O75474 233 aaPredicted RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 ABHD2P08910 425 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 SLC1A4P43007 532 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 MTIF2P46199 727 aaKnown RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 NT5C2P49902 561 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 PRELPP51888 382 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 SLC12A3P55017 1021 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 ACY1Q03154 408 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 EPC2Q52LR7 807 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 C9orf66Q5T8R8 295 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 DDI2Q5TDH0 399 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 RTL6Q6ICC9 239 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 SLC47A2Q86VL8 602 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 ZNF781Q8N8C0 355 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 C4orf32Q8N8J7 132 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 ICA1LQ8NDH6 482 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 FAM222BQ8WU58 562 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TAF15Q92804 592 aaKnown RBP eCLIP3.16□□□□□ -1.9
CD46-216ENST00000490278 DTD2Q96FN9 168 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 GPR137Q96N19 417 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 RUNDC3BQ96NL0 473 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 ZNF577Q9BSK1 485 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 DCTN5Q9BTE1 182 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TEX13AQ9BXU3 409 aaPredicted RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 LRRCC1Q9C099 1032 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 ABCG4Q9H172 646 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TRPV6Q9H1D0 765 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 NT5DC2Q9H857 520 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 GNB4Q9HAV0 340 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TRMT6Q9UJA5 497 aaKnown RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 SPATA2Q9UM82 520 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 DIMT1Q9UNQ2 313 aaKnown RBP3.16□□□□□ -1.9
CD46-216ENST00000490278 SALL1Q9NSC2 1324 aa3.16□□□□□ -1.9
CD46-216ENST00000490278 TDRD15B5MCY1 1934 aaKnown RBP3.15□□□□□ -1.9
CD46-216ENST00000490278 TRBV2A0A0J9YWF9 115 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 SYCE3A1L190 88 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 SHISA9B4DS77 424 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 HSF2BPO75031 334 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 DUSP11O75319 330 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 CXCL14O95715 111 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 HOXD4P09016 255 aaPredicted RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 ACADSP16219 412 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 SPRP35270 261 aaPredicted RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 PITPNBP48739 271 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 PGFP49763 221 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 GSK3BP49841 420 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 CNN1P51911 297 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 LIMK2P53671 638 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 SLC8A3P57103 927 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 CCZ1BP86790 482 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 CCZ1P86791 482 aaPredicted RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 CDKL1Q00532 357 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 PPP1R8Q12972 351 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 EXOSC7Q15024 291 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 PRAMEF7Q5VXH5 474 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 NKAIN2Q5VXU1 208 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 CDC42EP5Q6NZY7 148 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 TMUB2Q71RG4 321 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 TIPARPQ7Z3E1 657 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 POM121L12Q8N7R1 296 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 ZNRF1Q8ND25 227 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 OR1K1Q8NGR3 316 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 RAB39BQ96DA2 213 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 C16orf58Q96GQ5 468 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 HSD17B14Q9BPX1 270 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 RBM24Q9BX46 236 aaKnown RBP3.15□□□□□ -1.91
CD46-216ENST00000490278 RAB11FIP5Q9BXF6 653 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 ADNPQ9H2P0 1102 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 LIME1Q9H400 295 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 THAP9Q9H5L6 903 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 VPS54Q9P1Q0 977 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 TRIM10Q9UDY6 481 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 NARFQ9UHQ1 456 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 TSPAN16Q9UKR8 245 aa3.15□□□□□ -1.91
CD46-216ENST00000490278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.15□□□□□ -1.91
CD46-216ENST00000490278 IGHV3-16A0A0C4DH30 117 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 CCDC69A6NI79 296 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 MEI4A8MW99 385 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 TSPAN2O60636 221 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 PDGFBP01127 241 aaPredicted RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 MT-ND3P03897 115 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 FCER2P06734 321 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 OR9G9P0C7N8 305 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms