RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 TAGAPQ8N103 731 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 SPATA6LQ8N4H0 392 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 NEIL3Q8TAT5 605 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 PAQR8Q8TEZ7 354 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 CDKL2Q92772 493 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 RNASE6Q93091 150 aaKnown RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 ESAMQ96AP7 390 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 ANKRD9Q96BM1 317 aaPredicted RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 HSPBAP1Q96EW2 488 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 WDR34Q96EX3 536 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 ZNF597Q96LX8 424 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 PELOQ9BRX2 385 aaKnown RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 DOHHQ9BU89 302 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 MS4A8Q9BY19 250 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 TRIM31Q9BZY9 425 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 LIME1Q9H400 295 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 DMRT3Q9NQL9 472 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 MS4A12Q9NXJ0 267 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 QPCTLQ9NXS2 382 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 PHF11Q9UIL8 331 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 FOXD3Q9UJU5 478 aaPredicted RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 ZNF490Q9ULM2 529 aaPredicted RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 SNX12Q9UMY4 172 aa9.57□□□□□ -0.88
CHKB-211ENST00000489453 FLNAP21333 2647 aaKnown RBP9.57□□□□□ -0.88
CHKB-211ENST00000489453 CAPN14A8MX76 684 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TP53I11O14683 189 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 PROM1O43490 865 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TRAPPC6AO75865 159 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 FAM155BO75949 473 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 LRATO95237 230 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TBX6O95947 436 aaPredicted RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 TGFB1P01137 390 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 IL2RAP01589 272 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 RAF1P04049 648 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 RFPL3SP0C7P2 107 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 ALOX15P16050 662 aaPredicted RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 TACR1P25103 407 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 GGT5P36269 586 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 BUD31P41223 144 aaPredicted RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 MASP1P48740 699 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 PHEXP78562 749 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 SLAMF1Q13291 335 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 DDX39BQ13838 428 aaKnown RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 KEAP1Q14145 624 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TOMM20Q15388 145 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TBCCQ15814 346 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 OR4C11Q6IEV9 310 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 PAMR1Q6UXH9 720 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 RNF111Q6ZNA4 994 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 KIF18BQ86Y91 864 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 LACC1Q8IV20 430 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 C9orf40Q8IXQ3 194 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 LRRC25Q8N386 305 aaPredicted RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 RELL2Q8NC24 303 aaPredicted RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 BBOF1Q8ND07 529 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 OR10G3Q8NGC4 313 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 TANKQ92844 425 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 RGMAQ96B86 450 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 PPWD1Q96BP3 646 aaKnown RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 CMTM7Q96FZ5 175 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 FBXL20Q96IG2 436 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 ALPK1Q96QP1 1244 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 RPF2Q9H7B2 306 aaKnown RBP9.56□□□□□ -0.88
CHKB-211ENST00000489453 CAB39LQ9H9S4 337 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 ACKR4Q9NPB9 350 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 CBLCQ9ULV8 474 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 CAMK2AQ9UQM7 478 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 PCDHGB3Q9Y5G1 929 aa9.56□□□□□ -0.88
CHKB-211ENST00000489453 KIAA1549Q9HCM3 1950 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 HRNRQ86YZ3 2850 aaPredicted RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 TUBAL3A6NHL2 446 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 LRRC3CA6NJW4 275 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 AHRRA9YTQ3 701 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 SUPT3HB4E1H0 165 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 EEF1E1-BLOC1S5C9J1V9 151 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 PHGDHO43175 533 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 ZSCAN12O43309 604 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 EEF1E1O43324 174 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 SUPT3HO75486 399 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 SEC31AO94979 1220 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 FOSL1P15407 271 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 CD1DP15813 335 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 STMN1P16949 149 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 HOXB4P17483 251 aaPredicted RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 TCP1P17987 556 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 CD22P20273 847 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 IVDP26440 423 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 GCKP35557 465 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 HERVK_113P63132 956 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 ERVK-8P63133 956 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 RPP38P78345 283 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 IGLV3-21P80748 117 aaPredicted RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 TNFRSF17Q02223 184 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 ZNF267Q14586 743 aaPredicted RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 FASTKD3Q14CZ7 662 aaKnown RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 OR4D1Q15615 310 aa9.55□□□□□ -0.88
CHKB-211ENST00000489453 ACSF3Q4G176 576 aaPredicted RBP9.55□□□□□ -0.88
CHKB-211ENST00000489453 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms