RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 INSM1Q01101 510 aaPredicted RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 BNIP2Q12982 314 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 DSG2Q14126 1118 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 TRIM25Q14258 630 aaKnown RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 IL11RAQ14626 422 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 C1orf189Q5VU69 101 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 GPR155Q7Z3F1 870 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 PPP1R3BQ86XI6 285 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 ZNF595Q8IYB9 648 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 LRRC25Q8N386 305 aaPredicted RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 BMPERQ8N8U9 685 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 OR10A6Q8NH74 314 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 TBC1D20Q96BZ9 403 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 ASB9Q96DX5 294 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 ZNF304Q9HCX3 659 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 AKAP7Q9P0M2 348 aaPredicted RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 ACSL6Q9UKU0 697 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 CORO2BQ9UQ03 480 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 SNX8Q9Y5X2 465 aa19.64■□□□□ 0.73
SND1-214ENST00000489417 ASCC3Q8N3C0 2202 aaKnown RBP19.64■□□□□ 0.73
SND1-214ENST00000489417 RNF103-CHMP3A0A140T963 221 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 TMX2-CTNND1H3BSU7 103 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 LDB3O75112 727 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 C1QCP02747 245 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 PPP2R1BP30154 601 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 CHI3L1P36222 383 aaPredicted RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 XCR1P46094 333 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 MS4A2Q01362 244 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 MC2RQ01718 297 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 ID2Q02363 134 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 ABHD18Q0P651 414 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 TRIP6Q15654 476 aaKnown RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 SPDYE7PQ495Y7 208 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 ARHGAP40Q5TG30 622 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 CDCP2Q5VXM1 449 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 PWWP2BQ6NUJ5 590 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 GLRX5Q86SX6 157 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 CALHM3Q86XJ0 350 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 OR5AK3PQ8NH89 298 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 PNPT1Q8TCS8 783 aaKnown RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 COL26A1Q96A83 441 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 ANKRD9Q96BM1 317 aaPredicted RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 FAM120BQ96EK7 910 aaKnown RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 ZNF583Q96ND8 569 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 DPH2Q9BQC3 489 aaPredicted RBP19.63■□□□□ 0.73
SND1-214ENST00000489417 STRADBQ9C0K7 418 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 PIF1Q9H611 641 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 EPS8L2Q9H6S3 715 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 APMAPQ9HDC9 416 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 SEMA3GQ9NS98 782 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 TOR4AQ9NXH8 423 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 MAP4K5Q9Y4K4 846 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 PCDHB3Q9Y5E6 796 aa19.63■□□□□ 0.73
SND1-214ENST00000489417 FAM220BPB1ANY3 271 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 ACOT8O14734 319 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 B4GALT2O60909 372 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 TIAF1O95411 115 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 KRT75O95678 551 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 NTRK1P04629 796 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 FHP07954 510 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 HBQ1P09105 142 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 CPMP14384 443 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 PORP16435 677 aaPredicted RBP19.62■□□□□ 0.73
SND1-214ENST00000489417 GPX2P18283 190 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 HTR1EP28566 365 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 GZMMP51124 257 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 ACTR3P61158 418 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 TRAP1Q12931 704 aaKnown RBP19.62■□□□□ 0.73
SND1-214ENST00000489417 CROCCQ5TZA2 2017 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 YIPF2Q9BWQ6 316 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 PCDHAC1Q9H158 963 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 RAD21L1Q9H4I0 556 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 PRTFDC1Q9NRG1 225 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 USP22Q9UPT9 525 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 OTOGLQ3ZCN5 2332 aa19.62■□□□□ 0.73
SND1-214ENST00000489417 B4E171 279 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 CLDN4O14493 209 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 POLR1CO15160 346 aaPredicted RBP19.61■□□□□ 0.73
SND1-214ENST00000489417 CTNSO60931 367 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 BCAS2O75934 225 aaPredicted RBP19.61■□□□□ 0.73
SND1-214ENST00000489417 ATXN8OSP0DMR3 200 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 CCL4P13236 92 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 PTGER1P34995 402 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 TSPAN7P41732 249 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 OR4D2P58180 307 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 FLOT2Q14254 428 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 ERV3-1Q14264 604 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.61■□□□□ 0.73
SND1-214ENST00000489417 ANGPTL8Q6UXH0 198 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 TMEM64Q6YI46 380 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 MED25Q71SY5 747 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 C10orf111Q8N326 155 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 OR2T12Q8NG77 320 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 OR52N2Q8NGI0 321 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 OR9A2Q8NGT5 310 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 SFXN5Q8TD22 340 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 NEURL3Q96EH8 262 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 OR1F2PQ96R84 312 aa19.61■□□□□ 0.73
SND1-214ENST00000489417 CMKLR1Q99788 373 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms