RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LGR4Q9BXB1 951 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF717Q9BY31 904 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ROGDIQ9GZN7 287 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 EPS8L2Q9H6S3 715 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CXorf21Q9HAI6 301 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 MBNL1Q9NR56 388 aaKnown RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 WSB2Q9NYS7 404 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ANKMY1Q9P2S6 941 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 NDRG4Q9ULP0 352 aaKnown RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SNX7Q9UNH6 387 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ERVK-11Q9UQG0 969 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SH2B3Q9UQQ2 575 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TDRKHQ9Y2W6 561 aaKnown RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PCDHGA8Q9Y5G5 932 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SNX5Q9Y5X3 404 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CEP250Q9BV73 2442 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 USP34Q70CQ2 3546 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PCNX2A6NKB5 2137 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 IGHV1OR15-9A0A0B4J2B8 117 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 FAM221BA6H8Z2 402 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 PRICKLE3O43900 615 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 LRP3O75074 770 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF217O75362 1048 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SEC14L2O76054 403 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KLHL18O94889 574 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 PAK4O96013 591 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ACP5P13686 325 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 RHCEP18577 417 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 TGM1P22735 817 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 EEF1B2P24534 225 aaKnown RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 HTR1BP28222 390 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 CMPK1P30085 196 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SLC5A2P31639 672 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 IGFALSP35858 605 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 NUDT1P36639 197 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 TPMTP51580 245 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SMIM11AP58511 58 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 DSTNP60981 165 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 CSNK1G2P78368 415 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SRSF5Q13243 272 aaKnown RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KRT33BQ14525 404 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ZIC1Q15915 447 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SLC5A12Q1EHB4 618 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 PLK5Q496M5 336 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 OR4C11Q6IEV9 310 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ADNP2Q6IQ32 1131 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KCTD8Q6ZWB6 473 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 CHST15Q7LFX5 561 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 OFCC1Q8IZS5 231 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 PARP8Q8N3A8 854 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 LINC00471Q8N535 108 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 FRMD1Q8N878 549 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ANKRD53Q8N9V6 530 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 OR13F1Q8NGS4 319 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 OR14C36Q8NHC7 312 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SFXN5Q8TD22 340 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 HMGB4Q8WW32 186 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 IPCEF1Q8WWN9 437 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 FCGR1BQ92637 280 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 TM4SF18Q96CE8 201 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 NMD3Q96D46 503 aaKnown RBP8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SIPA1Q96FS4 1042 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 MPP4Q96JB8 637 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 HRASLS5Q96KN8 279 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KCNC2Q96PR1 638 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 OR2M4Q96R27 311 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SPATA5L1Q9BVQ7 753 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SLC6A17Q9H1V8 727 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SPNS1Q9H2V7 528 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 POLR1BQ9H9Y6 1135 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SMURF2Q9HAU4 748 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KRT84Q9NSB2 600 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 GPATCH2Q9NW75 528 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 SCN3BQ9NY72 215 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 TAAR2Q9P1P5 351 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KIF17Q9P2E2 1029 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 KLF15Q9UIH9 416 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ABCG2Q9UNQ0 655 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 POFUT2Q9Y2G5 429 aa8.02□□□□□ -1.13
VTI1A-207ENST00000489357 ASCC3Q8N3C0 2202 aaKnown RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 ARID1BQ8NFD5 2236 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 A0A0A6YYD5 115 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 PRSS38A1L453 326 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 LRIT2A6NDA9 550 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 H3BSA7 217 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 SLC1A7O00341 560 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 OR1F1O43749 312 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 MPZL2O60487 215 aa8.01□□□□□ -1.13
VTI1A-207ENST00000489357 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 SEC24DO94855 1032 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 OXSR1O95747 527 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 TBX6O95947 436 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-207ENST00000489357 B3GALT4O96024 378 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms