RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 Q9UF83 564 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 KIAA1217Q5T5P2 1943 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 A0A087X0K7 114 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ATP6AP2A0A1C7CYW4 349 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 TMCO5BA8MYB1 307 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 RTN2O75298 545 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 CSO75390 466 aaKnown RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 PIGRP01833 764 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MT-ND3P03897 115 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 PTMAP06454 111 aaKnown RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 UMPSP11172 480 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 FOSL2P15408 326 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ZNF19P17023 458 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 GLRA1P23415 457 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MAGEB1P43366 347 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 RPL27P61353 136 aaKnown RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 ST8SIA6P61647 398 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ARF5P84085 180 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MFGE8Q08431 387 aaPredicted RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 AP1B1Q10567 949 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ZNF789Q5FWF6 425 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 AGAP6Q5VW22 663 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 CAPN13Q6MZZ7 669 aaPredicted RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 NAT8LQ8N9F0 302 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 OR7G3Q8NG95 312 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 OR8H1Q8NGG4 311 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 KRT35Q92764 455 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ATP6V0A1Q93050 837 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 CABS1Q96KC9 395 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MCCC1Q96RQ3 725 aaPredicted RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 ACPTQ9BZG2 426 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 TMEM206Q9H813 350 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 NT5DC2Q9H857 520 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 SRD5A3Q9H8P0 318 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MID1IP1Q9NPA3 183 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 DNAJC17Q9NVM6 304 aaKnown RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 SEPT10Q9P0V9 454 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 MOSPD1Q9UJG1 213 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 ZNF256Q9Y2P7 627 aaPredicted RBP2.66□□□□□ -1.98
RFC4-213ENST00000489028 OR1A2Q9Y585 309 aa2.66□□□□□ -1.98
RFC4-213ENST00000489028 GPRASP1Q5JY77 1395 aa2.65□□□□□ -1.98
RFC4-213ENST00000489028 SDR42E2A6NKP2 422 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 KERAO60938 352 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 TSC22D2O75157 780 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 CSDE1O75534 798 aaKnown RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 OR6A2O95222 327 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 FASP25445 335 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 CASP3P42574 277 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 PPIAP62937 165 aaKnown RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 NAAAQ02083 359 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 SLC3A1Q07837 685 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 RPA4Q13156 261 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 KBTBD12Q3ZCT8 623 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 CCDC158Q5M9N0 1113 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 WDR25Q64LD2 544 aaPredicted RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 REP15Q6BDI9 236 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 ALKBH5Q6P6C2 394 aaKnown RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 PAMR1Q6UXH9 720 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 SLC34A3Q8N130 599 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 Q8N7P7 452 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 UBLCP1Q8WVY7 318 aaPredicted RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 PCED1BQ96HM7 432 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 RAB40CQ96S21 281 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 IDI2Q9BXS1 227 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 YTHDF1Q9BYJ9 559 aaKnown RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 SLC5A7Q9GZV3 580 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 ZBP1Q9H171 429 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 CXXC4Q9H2H0 198 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 CUEDC2Q9H467 287 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 TMEM161AQ9NX61 479 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 RCOR3Q9P2K3 495 aaPredicted RBP2.65□□□□□ -1.99
RFC4-213ENST00000489028 PSORS1C1Q9UIG5 152 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 FBXL5Q9UKA1 691 aa2.65□□□□□ -1.99
RFC4-213ENST00000489028 A0A1W2PRV1 198 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 MAGEB16A2A368 324 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 ZNF487B1APH4 448 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 LRRTM2O43300 516 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 SYT7O43581 403 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 KINO60870 393 aaKnown RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 DUSP11O75319 330 aaKnown RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 CRCPO75575 148 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 UROSP10746 265 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 EZRP15311 586 aaKnown RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 HMGCLP35914 325 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 FRKP42685 505 aaPredicted RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 CCR4P51679 360 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 LYZP61626 148 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 ACTN3Q08043 901 aaPredicted RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 SMC1AQ14683 1233 aaKnown RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 ABRAXAS2Q15018 415 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 TTC31Q49AM3 519 aaPredicted RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 DCAF12Q5T6F0 453 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 CGB2Q6NT52 195 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 ZNF600Q6ZNG1 722 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 CYP4V2Q6ZWL3 525 aaPredicted RBP2.64□□□□□ -1.99
RFC4-213ENST00000489028 SIAH3Q8IW03 269 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 KLHDC8AQ8IYD2 350 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 SAMD12Q8N8I0 201 aa2.64□□□□□ -1.99
RFC4-213ENST00000489028 CCDC197Q8NCU1 140 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms