RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	TNIP2	Q8NFZ5	429 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	NEIL3	Q8TAT5	605 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	ACTRT1	Q8TDG2	376 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	FAM222B	Q8WU58	562 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	ITPKC	Q96DU7	683 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	SPACA9	Q96E40	222 aa	Predicted RBP	10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	SENP5	Q96HI0	755 aa	Predicted RBP	10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	RUNDC3B	Q96NL0	473 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	KCNC2	Q96PR1	638 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	CAPS2	Q9BXY5	557 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	MS4A8	Q9BY19	250 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	DDX47	Q9H0S4	455 aa	Known RBP	10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	EXO5	Q9H790	373 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	ZFP64	Q9NPA5	681 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	ACKR4	Q9NPB9	350 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	DNAJC11	Q9NVH1	559 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	COPS7A	Q9UBW8	275 aa		10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.44	□□□□□ -0.74
SNU13-208	ENST00000488571	NIN	Q8N4C6	2090 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	CLGN	O14967	610 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	ATE1	O95260	518 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	DRD2	P14416	443 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	BMP5	P22003	454 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	TACR1	P25103	407 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	STT3A	P46977	705 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	HSPA7	P48741	367 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	TRPC1	P48995	793 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	ASCL1	P50553	236 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	DGKQ	P52824	942 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	KCNJ2	P63252	427 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	MGAT5	Q09328	741 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	E2F2	Q14209	437 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	DAZAP2	Q15038	168 aa	Predicted RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	ACSF3	Q4G176	576 aa	Predicted RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	CAMKMT	Q7Z624	323 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	LRRC8A	Q8IWT6	810 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	PDIK1L	Q8N165	341 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	SPATA6L	Q8N4H0	392 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	OR10G3	Q8NGC4	313 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	SLC22A8	Q8TCC7	542 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	ZNF473	Q8WTR7	871 aa	Known RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	RNASE6	Q93091	150 aa	Known RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	PPWD1	Q96BP3	646 aa	Known RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	PTCD3	Q96EY7	689 aa	Known RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	OSBPL9	Q96SU4	736 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	SMR3A	Q99954	134 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	TBCD	Q9BTW9	1192 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	DERL2	Q9GZP9	239 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	QPCTL	Q9NXS2	382 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	MOCS1	Q9NZB8	636 aa		10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	CNOT11	Q9UKZ1	510 aa	Known RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	BOK	Q9UMX3	212 aa	Predicted RBP	10.43	□□□□□ -0.74
SNU13-208	ENST00000488571	MPDZ	O75970	2070 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	DVL2	O14641	736 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	TP73	O15350	636 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	SH3BGRL	O75368	114 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	LRAT	O95237	230 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	EPPIN	O95925	133 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	FBXO45	P0C2W1	286 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	HIST1H1T	P22492	207 aa	Predicted RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	ZNF136	P52737	540 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	TGM3	Q08188	693 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	CRYZ	Q08257	329 aa	Known RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	DUSP8	Q13202	625 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	FASTKD3	Q14CZ7	662 aa	Known RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	MORF4L2	Q15014	288 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	PDK4	Q16654	411 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	DEFB113	Q30KQ7	82 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	VASH1	Q7L8A9	365 aa	Predicted RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	KRTAP1-3	Q8IUG1	177 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	ANKMY2	Q8IV38	441 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	SLC15A4	Q8N697	577 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	BBOF1	Q8ND07	529 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	FAM13C	Q8NE31	585 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	DOK4	Q8TEW6	326 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	LRRC39	Q96DD0	335 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	FBXL20	Q96IG2	436 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	EFCAB11	Q9BUY7	163 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	SORBS1	Q9BX66	1292 aa	Known RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	ROGDI	Q9GZN7	287 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	POPDC3	Q9HBV1	291 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	WWOX	Q9NZC7	414 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	CNIH4	Q9P003	139 aa		10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	NSD1	Q96L73	2696 aa	Predicted RBP	10.42	□□□□□ -0.74
SNU13-208	ENST00000488571	GOLGA6L10	A0A0M3HER8	536 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571		A0A1B0GTL3	188 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	AHRR	A9YTQ3	701 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SAP18	O00422	153 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TRIM3	O75382	744 aa	Predicted RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	STK16	O75716	305 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	PIAS1	O75925	651 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TGFB1	P01137	390 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	C1QA	P02745	245 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	RAF1	P04049	648 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CLPS	P04118	112 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	COX7A2	P14406	83 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CPN2	P22792	545 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	HOXC12	P31275	282 aa		10.41	□□□□□ -0.74

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