RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MFAP5Q13361 173 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 BMPR2Q13873 1038 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 FAM53BQ14153 422 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CSHL1Q14406 222 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ICAM4Q14773 271 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ZNF169Q14929 603 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-213ENST00000488386 NAA25Q14CX7 972 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 BTBD16Q32M84 506 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 KBTBD12Q3ZCT8 623 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 TOR1AIP1Q5JTV8 583 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 LRRC8EQ6NSJ5 796 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 TMEM205Q6UW68 189 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 IGFL2Q6UWQ7 119 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ZDHHC24Q6UX98 284 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 IGFL3Q6UXB1 125 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ISLR2Q6UXK2 745 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 FRA10AC1Q70Z53 315 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CPEB2Q7Z5Q1 589 aaKnown RBP5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ANKRD37Q7Z713 158 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 GALNT7Q86SF2 657 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CTAGE3PQ8IX95 158 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDHR3-213ENST00000488386 RNF175Q8N4F7 328 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 KIF2BQ8N4N8 673 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 PPM1NQ8N819 430 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CDYL2Q8N8U2 506 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CAMKVQ8NCB2 501 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 PIK3C3Q8NEB9 887 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 FBXO25Q8TCJ0 367 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 PPP4R1Q8TF05 950 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 PYROXD1Q8WU10 500 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CCT6BQ92526 530 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 TM9SF4Q92544 642 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 LRRC39Q96DD0 335 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 MVB12AQ96EY5 273 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 C16orf45Q96MC5 204 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-213ENST00000488386 TAAR6Q96RI8 345 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CYTH2Q99418 400 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 RBBP8Q99708 897 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 NPAS2Q99743 824 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 ERP44Q9BS26 406 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 TRIM54Q9BYV2 358 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 RHOJQ9H4E5 214 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 EPS8L2Q9H6S3 715 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 SEC61A2Q9H9S3 476 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 LANCL2Q9NS86 450 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 C14orf105Q9NVL8 296 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 C14orf119Q9NWQ9 140 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 CTNNAL1Q9UBT7 734 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 SH3BGRL2Q9UJC5 107 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 OARD1Q9Y530 152 aa5.54□□□□□ -1.52
CDHR3-213ENST00000488386 SETXQ7Z333 2677 aaKnown RBP5.54□□□□□ -1.52
CDHR3-213ENST00000488386 HECTD1Q9ULT8 2610 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 KCNE1BA0A087WTH5 132 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 LOC102723996A0A087X1L8 192 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 TRBC2A0A5B9 178 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 FAM159BA6NKW6 160 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 H0YIG0 161 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 TXNDC9O14530 226 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CLGNO14967 610 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 PRPF4O43172 522 aaKnown RBP eCLIP5.53□□□□□ -1.521e-8■□□□□ 8.9
CDHR3-213ENST00000488386 CCNT2O60583 730 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 GALR3O60755 368 aaPredicted RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 IPO13O94829 963 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SERPINA7P05543 415 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SLC35G6P0C7Q6 338 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CCDC166P0CW27 439 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CPEP16870 476 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 ALOX12P18054 663 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 MAOAP21397 527 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 PPP2R1BP30154 601 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 HNRNPH1P31943 449 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SLC6A12P48065 614 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 AGTR2P50052 363 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 HNRNPFP52597 415 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SLC12A2P55011 1212 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 AP1S2P56377 157 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SCAND1P57086 179 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 RHAGQ02094 409 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CALCOCO2Q13137 446 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SLMAPQ14BN4 828 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 ABRAXAS2Q15018 415 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 UAP1Q16222 522 aaPredicted RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SFT2D3Q587I9 215 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 C3orf62Q6ZUJ4 267 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CLNKQ7Z7G1 428 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 HPS6Q86YV9 775 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 CRLF3Q8IUI8 442 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 NKAPQ8N5F7 415 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 ABHD11Q8NFV4 315 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 OR4K1Q8NGD4 311 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 PPP1R14CQ8TAE6 165 aa5.53□□□□□ -1.52
CDHR3-213ENST00000488386 GABPB2Q8TAK5 448 aaPredicted RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 UTP15Q8TED0 518 aaKnown RBP5.53□□□□□ -1.52
CDHR3-213ENST00000488386 DOK4Q8TEW6 326 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms