RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	KIAA1217	Q5T5P2	1943 aa		4.16	□□□□□ -1.74
SRRM1-215	ENST00000488317	MAP3K19	Q56UN5	1328 aa		4.16	□□□□□ -1.74
SRRM1-215	ENST00000488317	KIF13A	Q9H1H9	1805 aa		4.16	□□□□□ -1.74
SRRM1-215	ENST00000488317	C5	P01031	1676 aa		4.16	□□□□□ -1.74
SRRM1-215	ENST00000488317	NFAT5	O94916	1531 aa		4.16	□□□□□ -1.74
SRRM1-215	ENST00000488317	CEMIP	Q8WUJ3	1361 aa		4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	MED23	Q9ULK4	1368 aa		4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	C4A	P0C0L4	1744 aa		4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	C4B	P0C0L5	1744 aa		4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	MYH8	P13535	1937 aa		4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	NPHP4	O75161	1426 aa	Predicted RBP	4.15	□□□□□ -1.74
SRRM1-215	ENST00000488317	GOLGA6L4	A6NEF3	574 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	CFAP73	A6NFT4	308 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	OGT	O15294	1046 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	MT-ATP6	P00846	226 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	SFTPB	P07988	381 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ACKR3	P25106	362 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	TIMP3	P35625	211 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	TNFSF10	P50591	281 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ATXN3	P54252	364 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	BTG1	P62324	171 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	CBX1	P83916	185 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	CARTPT	Q16568	116 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	TAF1B	Q53T94	588 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PRAMEF7	Q5VXH5	474 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	OR6B2	Q6IFH4	312 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	WDR88	Q6ZMY6	472 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	TAF8	Q7Z7C8	310 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	UNC5CL	Q8IV45	518 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	DCUN1D3	Q8IWE4	304 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	SLC43A2	Q8N370	569 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	OR4D10	Q8NGI6	311 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	MAPK15	Q8TD08	544 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	SMAP2	Q8WU79	429 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	SMPDL3A	Q92484	453 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	TAF4B	Q92750	862 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	CASP10	Q92851	521 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	SLCO4A1	Q96BD0	722 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNF486	Q96H40	463 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PRAC1	Q96KF2	57 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	C2orf48	Q96LS8	159 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	CTAGE1	Q96RT6	745 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	VIPAS39	Q9H9C1	493 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PIGV	Q9NUD9	493 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	MIS18A	Q9NYP9	233 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PLEK2	Q9NYT0	353 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNF319	Q9P2F9	582 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	KCNN3	Q9UGI6	736 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PILRA	Q9UKJ1	303 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PROCR	Q9UNN8	238 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	NUP188	Q5SRE5	1749 aa		4.15	□□□□□ -1.75
SRRM1-215	ENST00000488317	PLEKHG2	Q9H7P9	1386 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	TMEM2	Q9UHN6	1383 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ARHGAP23	Q9P227	1491 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	VPS37C	A5D8V6	355 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	TCP10L2	B9ZVM9	353 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ECE2	O60344	883 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	SURF6	O75683	361 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNF432	O94892	652 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	CALCA	P01258	141 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	EPO	P01588	193 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	GHR	P10912	638 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ANPEP	P15144	967 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	U2AF2	P26368	475 aa	Known RBP eCLIP	4.14	□□□□□ -1.75	2e-10	■□□□□ 10
SRRM1-215	ENST00000488317	CDKN1A	P38936	164 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	RABIF	P47224	123 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	PITPNB	P48739	271 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	PAX9	P55771	341 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	EVC	P57679	992 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	SNRPD1	P62314	119 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	GPR50	Q13585	617 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.14	□□□□□ -1.75	2e-6	■□□□□ 8.7
SRRM1-215	ENST00000488317	NECTIN1	Q15223	517 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	MTHFSD	Q2M296	383 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	FAM106A	Q4KMX7	169 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ISLR2	Q6UXK2	745 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	DLEU7	Q6UYE1	221 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	PPP1R42	Q7Z4L9	355 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	KDM8	Q8N371	416 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	MRPL43	Q8N983	215 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	GATAD1	Q8WUU5	269 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNRF4	Q8WWF5	429 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	RSPH1	Q8WYR4	309 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	AZIN2	Q96A70	460 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	TMEM186	Q96B77	213 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	CXorf58	Q96LI9	332 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	C16orf45	Q96MC5	204 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	LLPH	Q9BRT6	129 aa	Known RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	KRTAP4-2	Q9BYR5	136 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	TRPV6	Q9H1D0	765 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	HSD3B7	Q9H2F3	369 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	ZNF665	Q9H7R5	613 aa		4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.14	□□□□□ -1.75
SRRM1-215	ENST00000488317	CLIP2	Q9UDT6	1046 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms