RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CES1P1Q9UKY3 287 aa10.33□□□□□ -0.76
UBE4B-210ENST00000488228 EXO1Q9UQ84 846 aaKnown RBP10.33□□□□□ -0.76
UBE4B-210ENST00000488228 BSNQ9UPA5 3926 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 TCP11X1B4DZS4 312 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 K7EM74 188 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 HRKO00198 91 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 KALRNO60229 2985 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 OR10H2O60403 315 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PRR35P0CG20 571 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 CPMP14384 443 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 ALOX15P16050 662 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 DDCP20711 480 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PIK3R1P27986 724 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 MAPK1P28482 360 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 EPHA3P29320 983 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 FEN1P39748 380 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 STT3AP46977 705 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PGDP52209 483 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 C2orf80Q0P641 193 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 KCNAB2Q13303 367 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 SERTAD2Q14140 314 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 LY6DQ14210 128 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 ELAVL1Q15717 326 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PRSS53Q2L4Q9 553 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 SLC9B1Q4ZJI4 515 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 IL23RQ5VWK5 629 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PLAG1Q6DJT9 500 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 RGS9BPQ6ZS82 235 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 IKBIPQ70UQ0 350 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 TICAM1Q8IUC6 712 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 KBTBD2Q8IY47 623 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 SIRT6Q8N6T7 355 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF321PQ8N8H1 164 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 NFAM1Q8NET5 270 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 FDCSPQ8NFU4 85 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 BRIX1Q8TDN6 353 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 NCLNQ969V3 563 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PPWD1Q96BP3 646 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 CNRIP1Q96F85 164 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 THOC1Q96FV9 657 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 DGAT2Q96PD7 388 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 OR8D2Q9GZM6 311 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 MIEF1Q9NQG6 463 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 PFDN4Q9NQP4 134 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 RALYQ9UKM9 306 aaKnown RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 UTS2RQ9UKP6 389 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 TMED5Q9Y3A6 229 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 USH1CQ9Y6N9 552 aa10.32□□□□□ -0.76
UBE4B-210ENST00000488228 NUP214P35658 2090 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-210ENST00000488228 COL6A6A6NMZ7 2263 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 TRBV11-1A0A0K0K1C0 115 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 TRPC5OSA6NMA1 111 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF195O14628 629 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 DIAPH2O60879 1101 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 CEACAM4O75871 244 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 PDGFAP04085 211 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 SERPINA7P05543 415 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
UBE4B-210ENST00000488228 COX7A2P14406 83 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 DRD2P14416 443 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 TNNI3P19429 210 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 HPCAL1P37235 193 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 GSTM5P46439 218 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 XKP51811 444 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 DIO3P55073 304 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ERVK-8P63133 956 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 MYBPC3Q14896 1274 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 HEPACAMQ14CZ8 416 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 TERF2Q15554 542 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 LTB4RQ15722 352 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 EXT1Q16394 746 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF385BQ569K4 471 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 IRAK1BP1Q5VVH5 260 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 FCRLBQ6BAA4 426 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ST13P4Q8IZP2 240 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-210ENST00000488228 KRTCAP2Q8N6L1 136 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 EXD3Q8N9H8 876 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 B3GNT7Q8NFL0 401 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 OR4K14Q8NGD5 310 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 OR14A16Q8NHC5 309 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 SLC2A12Q8TD20 617 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 PTPMT1Q8WUK0 201 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-210ENST00000488228 NUDT8Q8WV74 236 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 MARK4Q96L34 752 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 OR52B2Q96RD2 323 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 SLC25A23Q9BV35 468 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 CNPPD1Q9BV87 410 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 LHPPQ9H008 270 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 NOP53Q9NZM5 478 aaKnown RBP10.31□□□□□ -0.76
UBE4B-210ENST00000488228 VTI1BQ9UEU0 232 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF223Q9UK11 482 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-210ENST00000488228 ENTPD4Q9Y227 616 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 TP53TG5Q9Y2B4 290 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 CLCA3PQ9Y6N3 262 aa10.31□□□□□ -0.76
UBE4B-210ENST00000488228 EML6Q6ZMW3 1958 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SLCO1B7G3V0H7 640 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 MKRN2OSH3BPM6 223 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms