RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 BORAQ6PGQ7 559 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 GPR155Q7Z3F1 870 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 SPATA19Q7Z5L4 167 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 C7orf57Q8NEG2 295 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 CEP70Q8NHQ1 597 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 PPWD1Q96BP3 646 aaKnown RBP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 RILPQ96NA2 401 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 SIKE1Q9BRV8 207 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 PELOQ9BRX2 385 aaKnown RBP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 ING2Q9H160 280 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 AIG1Q9NVV5 245 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 EHD3Q9NZN3 535 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 G3BP2Q9UN86 482 aaKnown RBP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 WBP11Q9Y2W2 641 aaKnown RBP11.94□□□□□ -0.5
PRDM2-208ENST00000487453 CLDN16Q9Y5I7 305 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 KCNMB2Q9Y691 235 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 DMXL2Q8TDJ6 3036 aa11.94□□□□□ -0.5
PRDM2-208ENST00000487453 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 A0A1W2PQ72 361 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 C17orf105B2RV13 164 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 DNAJB5O75953 348 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 CPMP14384 443 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 PORP16435 677 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 CSNK2A2P19784 350 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 NT5EP21589 574 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 ITGA3P26006 1051 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 NTSP30990 170 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 PTGER1P34995 402 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 RPL3P39023 403 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 XKP51811 444 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 NME5P56597 212 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SLC26A5P58743 744 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 AIMP2Q13155 320 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 RPS6KA2Q15349 733 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 EXT1Q16394 746 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 IRAK1BP1Q5VVH5 260 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 TMEM198Q66K66 360 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SAMD14Q8IZD0 417 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 ST13P4Q8IZP2 240 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 FAM9CQ8IZT9 166 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 LRRC25Q8N386 305 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 KRTCAP2Q8N6L1 136 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 OR14A16Q8NHC5 309 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SNRNP27Q8WVK2 155 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 DAZLQ92904 295 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 EXTL1Q92935 676 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 CNRIP1Q96F85 164 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 CHMP6Q96FZ7 201 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 RBM18Q96H35 190 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 WDR77Q9BQA1 342 aaPredicted RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 ARHGAP9Q9BRR9 750 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 DPY30Q9C005 99 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 FAM107BQ9H098 131 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 PRORYQ9H606 182 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 SH3BP4Q9P0V3 963 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
PRDM2-208ENST00000487453 EXO1Q9UQ84 846 aaKnown RBP11.93□□□□□ -0.5
PRDM2-208ENST00000487453 APC2O95996 2303 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 A6NL46 340 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 UBDO15205 165 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 PDPK1O15530 556 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 CELA2AP08217 269 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 SLC35E2P0CK97 266 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 IDO1P14902 403 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 DDX5P17844 614 aaKnown RBP11.92□□□□□ -0.5
PRDM2-208ENST00000487453 PRPS1L1P21108 318 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 LSP1P33241 339 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 CCL11P51671 97 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 STX1BP61266 288 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 DUSP2Q05923 314 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 BIKQ13323 160 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 RAPSNQ13702 412 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 TERF2Q15554 542 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 LTB4RQ15722 352 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 CGB2Q6NT52 195 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 DGAT2L6Q6ZPD8 337 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 R3HCC1LQ7Z5L2 792 aaKnown RBP11.92□□□□□ -0.5
PRDM2-208ENST00000487453 GALNT12Q8IXK2 581 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 KBTBD2Q8IY47 623 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 AMER2Q8N7J2 671 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 DOK4Q8TEW6 326 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 RIT1Q92963 219 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 MTERF3Q96E29 417 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 THOC3Q96J01 351 aaKnown RBP11.92□□□□□ -0.5
PRDM2-208ENST00000487453 ZNF317Q96PQ6 595 aaPredicted RBP11.92□□□□□ -0.5
PRDM2-208ENST00000487453 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 CNPPD1Q9BV87 410 aa11.92□□□□□ -0.5
PRDM2-208ENST00000487453 TMEM120AQ9BXJ8 343 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms