RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SLC15A4Q8N697 577 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 C9orf106Q8NAJ2 232 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 SLC22A8Q8TCC7 542 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 DOK4Q8TEW6 326 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 ANKRD7Q92527 254 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 MAGOHBQ96A72 148 aaKnown RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 LRRC46Q96FV0 321 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 EGFL8Q99944 293 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 PITHD1Q9GZP4 211 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 EHD1Q9H4M9 534 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 COPS7AQ9UBW8 275 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 MXRA5Q9NR99 2828 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 CD8B2A6NJW9 211 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 H7C1Q1 480 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 SIAH2O43255 324 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 TTC4O95801 387 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 IL2RAP01589 272 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 HPNP05981 417 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 GDF1P27539 372 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 PCSK6P29122 969 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 SLCO1A2P46721 670 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 CDK9P50750 372 aaKnown RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 NTRK2Q16620 822 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 FBXO48Q5FWF7 155 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 NHSL2Q5HYW2 709 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 FBXW10Q5XX13 1052 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 CCDC137Q6PK04 289 aaKnown RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 KIF18BQ86Y91 864 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 KRT78Q8N1N4 520 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 LIX1Q8N485 282 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF441Q8N8Z8 693 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 ACOT4Q8N9L9 421 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 FAM13CQ8NE31 585 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 PPWD1Q96BP3 646 aaKnown RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 HSPBAP1Q96EW2 488 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 WDYHV1Q96HA8 205 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 FBXL20Q96IG2 436 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 JSRP1Q96MG2 331 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 DOHHQ9BU89 302 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 MS4A8Q9BY19 250 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 COPS7BQ9H9Q2 264 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-228ENST00000487354 GPRC5BQ9NZH0 403 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 CNIH4Q9P003 139 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 SLC6A5Q9Y345 797 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 IKBKGQ9Y6K9 419 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 DSCAMO60469 2012 aa14.05□□□□□ -0.16
MCF2L-228ENST00000487354 CHD3Q12873 2000 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 ANKDD1BA6NHY2 528 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 EEF1E1-BLOC1S5C9J1V9 151 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 EEF1E1O43324 174 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 H2AFYO75367 372 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 PRKRAO75569 313 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 IL18BPO95998 194 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 CTSSP25774 331 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 KCNC1P48547 511 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 TAS2R39P59534 338 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 TBL3Q12788 808 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 FOXF2Q12947 444 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 DOC2AQ14183 400 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 E2F2Q14209 437 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 RCN2Q14257 317 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF662Q6ZS27 426 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 DND1Q8IYX4 353 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 BBOF1Q8ND07 529 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 SPATA3Q8NHX4 192 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 SMPDL3BQ92485 455 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF592Q92610 1267 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF597Q96LX8 424 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 DACH2Q96NX9 599 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 KCNC2Q96PR1 638 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 YIPF4Q9BSR8 244 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 MCMBPQ9BTE3 642 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 SORBS1Q9BX66 1292 aaKnown RBP14.04□□□□□ -0.16
MCF2L-228ENST00000487354 UGT2B28Q9BY64 529 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 WWTR1Q9GZV5 400 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 LZTFL1Q9NQ48 299 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 GALNT8Q9NY28 637 aa14.04□□□□□ -0.16
MCF2L-228ENST00000487354 ANKRD33BA6NCL7 494 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 NCF1BA6NI72 391 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 NCF1CA8MVU1 366 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 FAM171A2A8MVW0 826 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 NCF1P14598 390 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 BMP7P18075 431 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 HIST1H1TP22492 207 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 GGT5P36269 586 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 SLC37A1P57057 533 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 TGFBIQ15582 683 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 STEAP4Q687X5 459 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 TMEM64Q6YI46 380 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 ADAMTSL2Q86TH1 951 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 ZC3HC1Q86WB0 502 aaKnown RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 LRRC75A-AS1Q8N1F1 130 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 SPC24Q8NBT2 197 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 NANOS1Q8WY41 292 aaKnown RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 ESAMQ96AP7 390 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 TRIB1Q96RU8 372 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms