RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CPMP14384 443 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PORP16435 677 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 DDX5P17844 614 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 CSNK2A2P19784 350 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PLIN5Q00G26 463 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 ID2Q02363 134 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PDE7AQ13946 482 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PTGR1Q14914 329 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 NXNQ6DKJ4 435 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 TICAM1Q8IUC6 712 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 RIMKLAQ8IXN7 391 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 KLHL29Q96CT2 875 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 CNRIP1Q96F85 164 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 DGAT2Q96PD7 388 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 EBF4Q9BQW3 602 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 KCNK13Q9HB14 408 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 TCF7L2Q9NQB0 619 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 SLC35C2Q9NQQ7 365 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PNO1Q9NRX1 252 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 AIG1Q9NVV5 245 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 C5AR2Q9P296 337 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 ATP6V1HQ9UI12 483 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 PPIEQ9UNP9 301 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 ZNF780BQ9Y6R6 833 aa18.12■□□□□ 0.49
PCOLCE-208ENST00000487172 ZFHX4Q86UP3 3567 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 PTPRQQ9UMZ3 2332 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 SAGE2PA6NJ88 616 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 ARGFXA6NJG6 315 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 ANKRD28O15084 1053 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 ERAL1O75616 437 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 SEC24DO94855 1032 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 IFNA16P05015 189 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 TROVE2P10155 538 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 PRPS1L1P21108 318 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 AIMP2Q13155 320 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 EXT1Q16394 746 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 GSTA3Q16772 222 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 PLAG1Q6DJT9 500 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 NFAM1Q8NET5 270 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 OR14A16Q8NHC5 309 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 CLHC1Q8NHS4 586 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 PTPMT1Q8WUK0 201 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 APOBEC4Q8WW27 367 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 DAZLQ92904 295 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 GFM2Q969S9 779 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 BRINP2Q9C0B6 783 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 ING2Q9H160 280 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 ZNF160Q9HCG1 818 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 NPHS2Q9NP85 383 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 GIMAP4Q9NUV9 329 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 GPR45Q9Y5Y3 372 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 CROCCQ5TZA2 2017 aa18.11■□□□□ 0.49
PCOLCE-208ENST00000487172 MYOCOSA0A1B0GUC4 107 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 GABRR3A8MPY1 467 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 SCAMP2O15127 329 aaKnown RBP18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 AKAP10O43572 662 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 LRATO95237 230 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 ATP1B1P05026 303 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 COX7A2P14406 83 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 TNNI3P19429 210 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 LSP1P33241 339 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 HPCAL1P37235 193 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 GPR143P51810 404 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 GYS2P54840 703 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 SLC26A5P58743 744 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 AP2B1P63010 937 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 IRX1P78414 480 aaPredicted RBP18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 TBR1Q16650 682 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 PRSS53Q2L4Q9 553 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 SPRED3Q2MJR0 410 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 COL28A1Q2UY09 1125 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 CGB2Q6NT52 195 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 BORAQ6PGQ7 559 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 C19orf48Q6RUI8 117 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 NATD1Q8N6N6 113 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 CLEC1AQ8NC01 280 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 MORN4Q8NDC4 146 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 B3GNT7Q8NFL0 401 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 RFWD2Q8NHY2 731 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 M1APQ8TC57 530 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 EXOSC8Q96B26 276 aaKnown RBP18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 CHMP6Q96FZ7 201 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 CRELD1Q96HD1 420 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 DCTN4Q9UJW0 460 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 ENTPD4Q9Y227 616 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 CLCA3PQ9Y6N3 262 aa18.1■□□□□ 0.49
PCOLCE-208ENST00000487172 MAP1BP46821 2468 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 A0A1W2PS29 197 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 A8MUA0 341 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 MYO1GB0I1T2 1018 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 UBDO15205 165 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 OR10H2O60403 315 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 SERPINA7P05543 415 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 IDO1P14902 403 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 FEN1P39748 380 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 MRPL19P49406 292 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 Q0VFX4 171 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 ZNF750Q32MQ0 723 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 KBTBD2Q8IY47 623 aa18.09■□□□□ 0.49
PCOLCE-208ENST00000487172 LRRC25Q8N386 305 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms