RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CLPPQ16740 277 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 USP45Q70EL2 814 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 COMTD1Q86VU5 262 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 KRT73Q86Y46 540 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■□□ 15.6
HSPG2-211ENST00000486901 ZBED6CLQ96FA7 236 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CXorf36Q9H7Y0 433 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ASIC5Q9NY37 505 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SCG5P05408 212 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CYP2A6P11509 494 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CELP19835 753 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CSNK2BP67870 215 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CSTF1Q05048 431 aaKnown RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 GINS1Q14691 196 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CDKN3Q16667 212 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 WDR45BQ5MNZ6 344 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 DCST1Q5T197 706 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 IQCHQ86VS3 1027 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CFAP206Q8IYR0 622 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 OR4F15Q8NGB8 312 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 BBS10Q8TAM1 723 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SLC7A13Q8TCU3 470 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CLP1Q92989 425 aaKnown RBP11.78□□□□□ -0.52
HSPG2-211ENST00000486901 TMEM19Q96HH6 336 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 RNF170Q96K19 258 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 GPA33Q99795 319 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 RDH14Q9HBH5 336 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 FKBP14Q9NWM8 211 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 FTSJ1Q9UET6 329 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ATP6V1HQ9UI12 483 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
HSPG2-211ENST00000486901 SYN3O14994 580 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 IGSF6O95976 241 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 GALTP07902 379 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 TIA1P31483 386 aaKnown RBP eCLIP11.77□□□□□ -0.522e-22■□□□□ 9.3
HSPG2-211ENST00000486901 XCR1P46094 333 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 FCHO2Q0JRZ9 810 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 SYPL1Q16563 259 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 CST9Q5W186 159 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 TRMT11Q7Z4G4 463 aaKnown RBP11.77□□□□□ -0.52
HSPG2-211ENST00000486901 DNAJB7Q7Z6W7 309 aaPredicted RBP11.77□□□□□ -0.52
HSPG2-211ENST00000486901 NATD1Q8N6N6 113 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 FLCNQ8NFG4 579 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 OR4M1Q8NGD0 313 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 UBTD2Q8WUN7 234 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 UPRTQ96BW1 309 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 C1QTNF6Q9BXI9 259 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 CHST8Q9H2A9 424 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 C1GALT1Q9NS00 363 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 CNIH4Q9P003 139 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 STUB1Q9UNE7 303 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.52
HSPG2-211ENST00000486901 FAM183AA6NL82 134 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 ZAR1LA6NP61 321 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF821O75541 412 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 RECKO95980 971 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 LALBAP00709 142 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 OR12D1P0DN82 309 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 CD9P21926 228 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 AP1S1P61966 158 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 CAP1Q01518 475 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 FAPQ12884 760 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 C1DQ13901 141 aaKnown RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 HEPACAMQ14CZ8 416 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 OR8H3Q8N146 312 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 VWA5B2Q8N398 1253 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 DNAJB8Q8NHS0 232 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 GEMIN6Q8WXD5 167 aaKnown RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 PLA2G12AQ9BZM1 189 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 FAM83DQ9H4H8 585 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 PLEKHB1Q9UF11 243 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 PCDHGB2Q9Y5G2 931 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF780AO75290 641 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 DDX5P17844 614 aaKnown RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 IMPA1P29218 277 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 BUD31P41223 144 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 SRP9P49458 86 aaKnown RBP11.77□□□□□ -0.53
HSPG2-211ENST00000486901 GPR19Q15760 415 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 YIF1BQ5BJH7 314 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 FAM27D1Q5T7N8 215 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 LAS2Q8IYD9 372 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 SLC38A5Q8WUX1 472 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 SUV39H2Q9H5I1 410 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 EQTNQ9NQ60 294 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 DKK3Q9UBP4 350 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 SPEF1Q9Y4P9 236 aa11.77□□□□□ -0.53
HSPG2-211ENST00000486901 SHISA3A0PJX4 238 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms