RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 PARP8Q8N3A8 854 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 MAPK1IP1LQ8NDC0 245 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 SPPL2AQ8TCT8 520 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 HIST1H2ACQ93077 130 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 MRPL24Q96A35 216 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 ESAMQ96AP7 390 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 MRPL53Q96EL3 112 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 ALKBH3Q96Q83 286 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 COQ7Q99807 217 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 KRT23Q9C075 422 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ATG10Q9H0Y0 220 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 SP140LQ9H930 580 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 HPS4Q9NQG7 708 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 TECRQ9NZ01 308 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 NINJ2Q9NZG7 142 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 SPASTQ9UBP0 616 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ENTPD4Q9Y227 616 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 PIN4Q9Y237 131 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 NEDD8-MDP1E9PL57 170 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 RASGRF2O14827 1237 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 NXPH4O95158 308 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 SYNGR4O95473 234 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 CXCL10P02778 98 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 UGT1A4P22310 534 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 ACP1P24666 158 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 ASMTP46597 345 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 LIMK2P53671 638 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 BPIFB3P59826 476 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 GMFBP60983 142 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 NME3Q13232 169 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 EXOSC7Q15024 291 aaKnown RBP3.82□□□□□ -1.8
SMC4-218ENST00000486711 MS4A18Q3C1V0 323 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 RBM43Q6ZSC3 357 aaKnown RBP3.82□□□□□ -1.8
SMC4-218ENST00000486711 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 GVQW1Q8N7I0 195 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 COLGALT1Q8NBJ5 622 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 ZNF599Q96NL3 588 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 ANKRD27Q96NW4 1050 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 AGAP3Q96P47 875 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 ZNF577Q9BSK1 485 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 FTHL17Q9BXU8 183 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 THEGQ9P2T0 379 aa3.82□□□□□ -1.8
SMC4-218ENST00000486711 DIMT1Q9UNQ2 313 aaKnown RBP3.82□□□□□ -1.8
SMC4-218ENST00000486711 IGHV3-20A0A0C4DH32 117 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 G3V2L1 256 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 ARPC1BO15143 372 aaKnown RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 IDH3BO43837 385 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 GNSP15586 552 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 IRX1P78414 480 aaPredicted RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 CALCOCO2Q13137 446 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 BTG3Q14201 252 aaPredicted RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 FASTKQ14296 549 aaKnown RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 P2RY14Q15391 338 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 TAF1BQ53T94 588 aaPredicted RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 DCAF12Q5T6F0 453 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 NEPROQ6NW34 567 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 CWC27Q6UX04 472 aaKnown RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 OLFM4Q6UX06 510 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 GDPGP1Q6ZNW5 385 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 C1orf186Q6ZWK4 172 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 ASRGL1Q7L266 308 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 BNIPLQ7Z465 357 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 WDR49Q8IV35 697 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 ELMOD2Q8IZ81 293 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 AQP11Q8NBQ7 271 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 RDH11Q8TC12 318 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 PCNPQ8WW12 178 aaKnown RBP3.81□□□□□ -1.8
SMC4-218ENST00000486711 POM121L2Q96KW2 1035 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 KCNK16Q96T55 309 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 DCTN5Q9BTE1 182 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 STRADBQ9C0K7 418 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 HSD3B7Q9H2F3 369 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 NUDT4Q9NZJ9 180 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 PLA2G4CQ9UP65 541 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 NUDCQ9Y266 331 aa3.81□□□□□ -1.8
SMC4-218ENST00000486711 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 SH3PXD2BA1X283 911 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 ASB14A6NK59 587 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 MEI4A8MW99 385 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 FBP2O00757 339 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 B3GALNT1O75752 331 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 OR6B1O95007 311 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 PROS1P07225 676 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 FHP07954 510 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 CCNA2P20248 432 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 HSPA1LP34931 641 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 ID1P41134 155 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 RABIFP47224 123 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 SLC1A6P48664 564 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 NOVP48745 357 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 CLK1P49759 484 aaKnown RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 CCL11P51671 97 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 NLRP11P59045 1033 aaKnown RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 RPL27P61353 136 aaKnown RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 RIGQ13278 110 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 KNOP1Q1ED39 458 aaKnown RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 EPC2Q52LR7 807 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 FAAP20Q6NZ36 180 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms