RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
U2AF1-211ENST00000486519 PCYT1AP49585 367 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 MTTPP55157 894 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 FBXW4P57775 412 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 SESN2P58004 480 aaPredicted RBP13.75□□□□□ -0.21
U2AF1-211ENST00000486519 FAPQ12884 760 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 CTBP1Q13363 440 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 NTRK2Q16620 822 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 ZNF595Q8IYB9 648 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 SNF8Q96H20 258 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 KLHL4Q9C0H6 718 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 CHODLQ9H9P2 273 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.21
U2AF1-211ENST00000486519 IKBKGQ9Y6K9 419 aa13.75□□□□□ -0.21
U2AF1-211ENST00000486519 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 SSX4O60224 188 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 LMX1BO60663 402 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 CTNSO60931 367 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 TBX6O95947 436 aaPredicted RBP13.74□□□□□ -0.21
U2AF1-211ENST00000486519 ETS1P14921 441 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 CERS1P27544 350 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 PTPN6P29350 595 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 PTPN7P35236 360 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 AHRP35869 848 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 LIM2P55344 173 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 COPS2P61201 443 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 GAB1Q13480 694 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 KCTD19Q17RG1 926 aaPredicted RBP13.74□□□□□ -0.21
U2AF1-211ENST00000486519 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 FAM120AOSQ5T036 256 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 GRAMD2AQ8IUY3 354 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 ZNF610Q8N9Z0 462 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
U2AF1-211ENST00000486519 SENP5Q96HI0 755 aaPredicted RBP13.74□□□□□ -0.21
U2AF1-211ENST00000486519 GPR21Q99679 349 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 TEX10Q9NXF1 929 aaPredicted RBP13.74□□□□□ -0.21
U2AF1-211ENST00000486519 EFR3BQ9Y2G0 817 aa13.74□□□□□ -0.21
U2AF1-211ENST00000486519 TCRBV7S2A1N4TA0A589 114 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 C2orf72A6NCS6 295 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 EIF3FO00303 357 aaPredicted RBP13.73□□□□□ -0.21
U2AF1-211ENST00000486519 PLOD2O00469 737 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 UBFD1O14562 309 aaKnown RBP13.73□□□□□ -0.21
U2AF1-211ENST00000486519 OR10H2O60403 315 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
U2AF1-211ENST00000486519 DESI1Q6ICB0 168 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 ATG4DQ86TL0 474 aaPredicted RBP13.73□□□□□ -0.21
U2AF1-211ENST00000486519 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 ALG3Q92685 438 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
U2AF1-211ENST00000486519 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 GAL3ST4Q96RP7 486 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 DHRS7Q9Y394 339 aa13.73□□□□□ -0.21
U2AF1-211ENST00000486519 ANKRD33BA6NCL7 494 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
U2AF1-211ENST00000486519 ACTL6AO96019 429 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 CD8AP01732 235 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 SERPINA6P08185 405 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 PTNP21246 168 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
U2AF1-211ENST00000486519 MSH2P43246 934 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 KCNJ5P48544 419 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 MASP1P48740 699 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 TBL3Q12788 808 aaKnown RBP13.72□□□□□ -0.21
U2AF1-211ENST00000486519 STX4Q12846 297 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 LIPNQ5VXI9 398 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 ADNP2Q6IQ32 1131 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 UGT3A1Q6NUS8 523 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 CAND1Q86VP6 1230 aaKnown RBP13.72□□□□□ -0.21
U2AF1-211ENST00000486519 WFDC8Q8IUA0 241 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 OR4N5Q8IXE1 308 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 DEPDC4Q8N2C3 294 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 SLC15A4Q8N697 577 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 OR56A3Q8NH54 315 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 SPPL2AQ8TCT8 520 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 HTRA1Q92743 480 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 HAUS8Q9BT25 410 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
U2AF1-211ENST00000486519 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
U2AF1-211ENST00000486519 URADA6NGE7 173 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 HCRTR2O43614 444 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 CLPSP04118 112 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 SERPINB3P29508 390 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 SLC6A12P48065 614 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 LHX2P50458 406 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 PLA2G16P53816 162 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 CLDN18P56856 261 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 TIAL1Q01085 375 aaKnown RBP eCLIP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 DHX9Q08211 1270 aaKnown RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 LOXL1Q08397 574 aaPredicted RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 PGGHGQ32M88 737 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 TTLL9Q3SXZ7 439 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 BBS9Q3SYG4 887 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 MRNIPQ6NTE8 343 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms