RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 FBXL20Q96IG2 436 aa23.75■■□□□ 1.39
HLA-F-227ENST00000485513 IPPKQ9H8X2 491 aa23.75■■□□□ 1.39
HLA-F-227ENST00000485513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.75■■□□□ 1.39
HLA-F-227ENST00000485513 LYARQ9NX58 379 aaKnown RBP23.75■■□□□ 1.39
HLA-F-227ENST00000485513 CPSF2Q9P2I0 782 aaKnown RBP23.75■■□□□ 1.39
HLA-F-227ENST00000485513 TNPO3Q9Y5L0 923 aaKnown RBP23.75■■□□□ 1.39
HLA-F-227ENST00000485513 CSMD2Q7Z408 3487 aa23.75■■□□□ 1.39
HLA-F-227ENST00000485513 POLQO75417 2590 aa23.75■■□□□ 1.39
HLA-F-227ENST00000485513 HRKO00198 91 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 PROM1O43490 865 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 IGHG3P01860 377 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 ALDOAP04075 364 aaKnown RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 CHRNB4P30926 498 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 PHBP35232 272 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 MAGEA5P43359 124 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 PIK3CGP48736 1102 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 DNASE1L1P49184 302 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 CKAP4Q07065 602 aaKnown RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 FOXO1Q12778 655 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 GXYLT1Q4G148 440 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 ST13P4Q8IZP2 240 aaPredicted RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 RPRMLQ8N4K4 120 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 CHTF18Q8WVB6 975 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 C14orf79Q96F83 325 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 GPR78Q96P69 363 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 SMC6Q96SB8 1091 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 PELOQ9BRX2 385 aaKnown RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 LRRC1Q9BTT6 524 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 ZNF717Q9BY31 904 aaPredicted RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 RNF6Q9Y252 685 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 LIPGQ9Y5X9 500 aa23.74■■□□□ 1.39
HLA-F-227ENST00000485513 TEP1Q99973 2627 aaKnown RBP23.74■■□□□ 1.39
HLA-F-227ENST00000485513 OR14I1A6ND48 311 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 EEDO75530 441 aaKnown RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 SIX3O95343 332 aaPredicted RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 BSGP35613 385 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 PMPCAQ10713 525 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 CUL3Q13618 768 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 ZNF791Q3KP31 576 aaPredicted RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 MRM1Q6IN84 353 aaKnown RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 METTL2BQ6P1Q9 378 aaKnown RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 CYP20A1Q6UW02 462 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 L3MBTL4Q8NA19 623 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 OR5M3Q8NGP4 307 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 LILRB4Q8NHJ6 448 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 DOK4Q8TEW6 326 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 CNPPD1Q9BV87 410 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 VPS11Q9H270 941 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 DDX31Q9H8H2 851 aaKnown RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 PNPLA3Q9NST1 481 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 TUBA8Q9NY65 449 aaPredicted RBP23.73■■□□□ 1.39
HLA-F-227ENST00000485513 RNF11Q9Y3C5 154 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 ASB4Q9Y574 426 aa23.73■■□□□ 1.39
HLA-F-227ENST00000485513 A0A0A6YYD5 115 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 IQANK1A0A1B0GTG1 560 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 BCKDKO14874 412 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 TMPRSS11DO60235 418 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 OR10H2O60403 315 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 NADKO95544 446 aaPredicted RBP23.72■■□□□ 1.39
HLA-F-227ENST00000485513 GPR75O95800 540 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 FAM58BPP0C7Q3 252 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 NR2F6P10588 404 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 HERVK_113P63132 956 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 ERVK-8P63133 956 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 HYAL4Q2M3T9 481 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 SLC22A10Q63ZE4 541 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 ACAD11Q709F0 780 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 TRILQ7L0X0 811 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 SLC15A4Q8N697 577 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 OR5M9Q8NGP3 310 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 WDR20Q8TBZ3 569 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 SPACA9Q96E40 222 aaPredicted RBP23.72■■□□□ 1.39
HLA-F-227ENST00000485513 TREX2Q9BQ50 279 aaPredicted RBP23.72■■□□□ 1.39
HLA-F-227ENST00000485513 ERVK-6Q9BXR3 956 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 ACSS3Q9H6R3 686 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 WDR41Q9HAD4 459 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 PSD3Q9NYI0 1048 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 NINJ2Q9NZG7 142 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 ERVK-19Q9WJR5 959 aa23.72■■□□□ 1.39
HLA-F-227ENST00000485513 CCDC168Q8NDH2 2452 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 INTS1Q8N201 2190 aaKnown RBP23.71■■□□□ 1.39
HLA-F-227ENST00000485513 A0A1B0GVC2 190 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 ATP6AP2A0A1C7CYW4 349 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 A0A1W2PR48 441 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 GLOD5A6NK44 160 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 FAM90A27PA6NNH2 459 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 WASHC1A8K0Z3 465 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 FOXE1O00358 373 aaPredicted RBP23.71■■□□□ 1.39
HLA-F-227ENST00000485513 ATP6AP2O75787 350 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 PIGAP37287 484 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 NEK2P51955 445 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 NUP107P57740 925 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 ZNF267Q14586 743 aaPredicted RBP23.71■■□□□ 1.39
HLA-F-227ENST00000485513 SLC10A1Q14973 349 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 SPRED3Q2MJR0 410 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 TECRLQ5HYJ1 363 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 LYPD8Q6UX82 237 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 RNF111Q6ZNA4 994 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 SLC29A4Q7RTT9 530 aa23.71■■□□□ 1.39
HLA-F-227ENST00000485513 CCDC71Q8IV32 467 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms