RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 OR10H2O60403 315 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 EPORP19235 508 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 GMPRP36959 345 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 PIK3CBP42338 1070 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 STT3AP46977 705 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 PIK3CGP48736 1102 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 TNFRSF17Q02223 184 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 CKAP4Q07065 602 aaKnown RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 TFF3Q07654 80 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 TBL3Q12788 808 aaKnown RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 ASPHQ12797 758 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 DLG1Q12959 904 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 PFKFB4Q16877 469 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 C6orf163Q5TEZ5 329 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 MROH9Q5TGP6 573 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 ZNF585AQ6P3V2 769 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 UBE3DQ7Z6J8 389 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 ZNF321PQ8N8H1 164 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 HUS1BQ8NHY5 278 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 RHEBL1Q8TAI7 183 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 ZNF721Q8TF20 911 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 KCTD4Q8WVF5 259 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 ATP6V1E2Q96A05 226 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 ANKRD9Q96BM1 317 aaPredicted RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 SMC6Q96SB8 1091 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 IL1RL2Q9HB29 575 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 LYARQ9NX58 379 aaKnown RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
UBA3-210ENST00000485424 HRH3Q9Y5N1 445 aa12.26□□□□□ -0.45
UBA3-210ENST00000485424 CCDC189A1A4V9 331 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 PINLYPA6NC86 204 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 NKX2-6A6NCS4 301 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 OR14I1A6ND48 311 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SCELO95171 688 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 ETHE1O95571 254 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 ALOX15P16050 662 aaPredicted RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 PTX3P26022 381 aaPredicted RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 TYK2P29597 1187 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 MAGEA5P43359 124 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 DNASE1L1P49184 302 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 MAN2A2P49641 1150 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 ALDH18A1P54886 795 aaKnown RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 RPS13P62277 151 aaKnown RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 KCNJ2P63252 427 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 FOLH1Q04609 750 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 PMPCAQ10713 525 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 E2F2Q14209 437 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SLC10A1Q14973 349 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SETDB1Q15047 1291 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 ACAP2Q15057 778 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBA3-210ENST00000485424 MPEG1Q2M385 716 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 WLSQ5T9L3 541 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SLC22A10Q63ZE4 541 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 SYT10Q6XYQ8 523 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 RNF111Q6ZNA4 994 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 RPRMLQ8N4K4 120 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 NUBPLQ8TB37 319 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SARAFQ96BY9 339 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SENP5Q96HI0 755 aaPredicted RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 GAL3ST4Q96RP7 486 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 SORBS1Q9BX66 1292 aaKnown RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 VPS11Q9H270 941 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 DMRT3Q9NQL9 472 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 IGSF5Q9NSI5 407 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 ACAD8Q9UKU7 415 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 BOKQ9UMX3 212 aaPredicted RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 RNF6Q9Y252 685 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 TNPO3Q9Y5L0 923 aaKnown RBP12.25□□□□□ -0.45
UBA3-210ENST00000485424 IKBKGQ9Y6K9 419 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 MED12LQ86YW9 2145 aa12.25□□□□□ -0.45
UBA3-210ENST00000485424 A0A096LPK6 155 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ATP6AP2A0A1C7CYW4 349 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 PLPP1O14494 284 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 UGDHO60701 494 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ATP6AP2O75787 350 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 C2P06681 752 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 NR2F6P10588 404 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 SERPINB8P50452 374 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 NR0B1P51843 470 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 ARFIP1P53367 373 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ETF1P62495 437 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 HERVK_113P63132 956 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ERVK-8P63133 956 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 IRF9Q00978 393 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 GTF2H2Q13888 395 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 ZNF267Q14586 743 aaPredicted RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 GXYLT1Q4G148 440 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 PIGGQ5H8A4 983 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 C18orf63Q68DL7 685 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 GTF2H2CQ6P1K8 395 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 TAOK1Q7L7X3 1001 aa12.24□□□□□ -0.45
UBA3-210ENST00000485424 DND1Q8IYX4 353 aaKnown RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 ST13P4Q8IZP2 240 aaPredicted RBP12.24□□□□□ -0.45
UBA3-210ENST00000485424 ZCCHC7Q8N3Z6 543 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms