RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ARMC4Q5T2S8 1044 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 RAET1GQ6H3X3 334 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 KIRREL2Q6UWL6 708 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 NLRP9Q7RTR0 991 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 GLT6D1Q7Z4J2 308 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 PIP4P1Q86T03 277 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 HOOK3Q86VS8 718 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 TRAM1L1Q8N609 369 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 DEFB124Q8NES8 71 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 OR56A4Q8NGH8 313 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 PTPMT1Q8WUK0 201 aaPredicted RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 HEXDCQ8WVB3 486 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 FUBP1Q96AE4 644 aaKnown RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 MOAP1Q96BY2 351 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 COX14Q96I36 57 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 MS4A14Q96JA4 679 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 LINC00615Q96LM1 132 aaPredicted RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 TMEM68Q96MH6 324 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 VPS35Q96QK1 796 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 RANBP9Q96S59 729 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 CDRT15Q96T59 188 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 ATP6V0BQ99437 205 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 FICDQ9BVA6 458 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 IFT27Q9BW83 186 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 ABCG8Q9H221 673 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 FZD3Q9NPG1 666 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 TRNAU1APQ9NX07 287 aaKnown RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 BFARQ9NZS9 450 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 VPS18Q9P253 973 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 SPASTQ9UBP0 616 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 CNOT6Q9ULM6 557 aaKnown RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 CA5BQ9Y2D0 317 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 DTX4Q9Y2E6 619 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 KCNK7Q9Y2U2 307 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 HEMK1Q9Y5R4 338 aaPredicted RBP5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 SCN8AQ9UQD0 1980 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 FLNCQ14315 2725 aa5.32□□□□□ -1.56
NHLRC3-205ENST00000485407 LRP4O75096 1905 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF106Q9H2Y7 1883 aaKnown RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 MAGEB16A2A368 324 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 HEATR9A2RTY3 570 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 TMEM247A6NEH6 219 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 NPIPB11E5RHQ5 1161 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LMO7DNF2Z398 122 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ETV2O00321 342 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 PRYO14603 147 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SPRY1O43609 319 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LDB2O43679 373 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 VEGFDO43915 354 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 KCNJ13O60928 360 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SEC22BO75396 215 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 NXPH3O95157 252 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 TSPAN15O95858 294 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 KRT14P02533 472 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 PCCBP05166 539 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 IVLP07476 585 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ALPPL2P10696 532 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 MLNP12872 115 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 GP1BBP13224 206 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 CTSEP14091 401 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ETS1P14921 441 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF182P17025 639 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 DGKAP23743 735 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SPAM1P38567 509 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 CSRP3P50461 194 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 CLCNKAP51800 687 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 TPD52P55327 224 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 BASP1P80723 227 aaKnown RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SEMG2Q02383 582 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ILKQ13418 452 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SHBQ15464 509 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 RPE65Q16518 533 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 MEP1BQ16820 701 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 TBC1D25Q3MII6 688 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 GPR33Q49SQ1 333 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LDLRAP1Q5SW96 308 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LRRC8BQ6P9F7 803 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ENPP7Q6UWV6 458 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 PPP1R21Q6ZMI0 780 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 Q6ZRM9 215 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LINC00696Q6ZRV3 163 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 Q6ZWC4 215 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 MDGA2Q7Z553 956 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 GKN2Q86XP6 184 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 KLHL7Q8IXQ5 586 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SLC25A45Q8N413 288 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 SLC25A41Q8N5S1 370 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 DNAAF3Q8N9W5 541 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 GPR26Q8NDV2 337 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 OR6C4Q8NGE1 309 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 OR4C6Q8NH72 309 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 BLOC1S5Q8TDH9 187 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 LPGAT1Q92604 370 aa5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 PTCD3Q96EY7 689 aaKnown RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 ZNF514Q96K75 400 aaPredicted RBP5.31□□□□□ -1.56
NHLRC3-205ENST00000485407 RIOK2Q9BVS4 552 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms