RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MVDP53602 400 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 SKP1P63208 163 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 NIPAL1Q6NVV3 410 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 DGAT2L6Q6ZPD8 337 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ZC3H7AQ8IWR0 971 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CCDC116Q8IYX3 515 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 OR9A2Q8NGT5 310 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TBC1D20Q96BZ9 403 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 LIN37Q96GY3 246 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 HOPXQ9BPY8 73 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ANKRA2Q9H9E1 313 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ZNF304Q9HCX3 659 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 PRDM9Q9NQV7 894 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 FBXO8Q9NRD0 319 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 PRPF19Q9UMS4 504 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 B3GALT1Q9Y5Z6 326 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 FREM2Q5SZK8 3169 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TEX51A0A1B0GUA7 166 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 B4E171 279 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 FHP07954 510 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MAOAP21397 527 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 FBLP22087 321 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TSPAN7P41732 249 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MANFP55145 182 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CORO7P57737 925 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 MLC1Q15049 377 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 VWA2Q5GFL6 755 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ARHGAP40Q5TG30 622 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ZNF621Q6ZSS3 439 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 RAB11FIP2Q7L804 512 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 SCUBE1Q8IWY4 988 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 FAM13CQ8NE31 585 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 OR8J3Q8NGG0 315 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ZFP90Q8TF47 636 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ZBED6CLQ96FA7 236 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ADA2Q9NZK5 511 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 TRPC4Q9UBN4 977 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 ENTPD4Q9Y227 616 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
LRIF1-202ENST00000485275 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CNOT3O75175 753 aaKnown RBP13.65□□□□□ -0.22
LRIF1-202ENST00000485275 BMP10O95393 424 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 ANP32DO95626 131 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 ZCCHC18P0CG32 403 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CPMP14384 443 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 TCN1P20061 433 aaPredicted RBP13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CSRP1P21291 193 aaKnown RBP13.65□□□□□ -0.22
LRIF1-202ENST00000485275 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 NTSP30990 170 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 XKP51811 444 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CASP9P55211 416 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 MRPS35P82673 323 aaKnown RBP13.65□□□□□ -0.22
LRIF1-202ENST00000485275 ADCY4Q8NFM4 1077 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 OR4K14Q8NGD5 310 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 NETO1Q8TDF5 533 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CLIP3Q96DZ5 547 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 EPS8L2Q9H6S3 715 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 CLK4Q9HAZ1 481 aaKnown RBP13.65□□□□□ -0.22
LRIF1-202ENST00000485275 SLC39A1Q9NY26 324 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 PTPRBP23467 1997 aa13.65□□□□□ -0.22
LRIF1-202ENST00000485275 NME6O75414 186 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 GPR75O95800 540 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 CSNK2A2P19784 350 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 GZMMP51124 257 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 IGLV3-21P80748 117 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 CPZQ66K79 652 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 TMEM107Q6UX40 140 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 LAPTM4BQ86VI4 370 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 LRRC25Q8N386 305 aaPredicted RBP13.64□□□□□ -0.23
LRIF1-202ENST00000485275 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 DNAJB8Q8NHS0 232 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 TANKQ92844 425 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 MESP1Q9BRJ9 268 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 STRADBQ9C0K7 418 aa13.64□□□□□ -0.23
LRIF1-202ENST00000485275 CHST8Q9H2A9 424 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms