RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PIK3C3Q8NEB9 887 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 SLC35G5Q96KT7 338 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF300Q96RE9 604 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PDP1Q9P0J1 537 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-225ENST00000483495 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
CPNE1-225ENST00000483495 MDC1Q14676 2089 aaKnown RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 ARHGEF17Q96PE2 2063 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 LOC105369274A0A096LPK9 316 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 LOC102723532A0A0G2JNH3 316 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 LOC100130705A0A1B0GUX0 176 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 C5orf58C9J3I9 102 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 ZSCAN9O15535 394 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 PRAMEF10O60809 474 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 ERAL1O75616 437 aaKnown RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 DNAJB5O75953 348 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 PDE9AO76083 593 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 SEC24DO94855 1032 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 RECKO95980 971 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 BCHEP06276 602 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 NR2F6P10588 404 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 CD38P28907 300 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 TNFRSF17Q02223 184 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 DUSP2Q05923 314 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 TP53BP2Q13625 1128 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 SIM2Q14190 667 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 BORAQ6PGQ7 559 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 OOSP2Q86WS3 158 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 OR4N4Q8N0Y3 316 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 FAM46DQ8NEK8 389 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 APOBEC4Q8WW27 367 aaKnown RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
CPNE1-225ENST00000483495 GIMAP4Q9NUV9 329 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 PSME2Q9UL46 239 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
CPNE1-225ENST00000483495 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 H0YGG7 62 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 MFN2O95140 757 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 CD247P20963 164 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF10P21506 573 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RRM2P31350 389 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 MPIP34949 423 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 XCR1P46094 333 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RPS6KA3P51812 740 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 ABHD13Q7L211 337 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 DGLUCYQ7Z3D6 616 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 AVL9Q8NBF6 648 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 OR56A1Q8NGH5 318 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 OR4C15Q8NGM1 316 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RAB8BQ92930 207 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RERGQ96A58 199 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RBM38Q9H0Z9 239 aaKnown RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 OR51I1Q9H343 314 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 UCK1Q9HA47 277 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 DDX18Q9NVP1 670 aaKnown RBP12.49□□□□□ -0.41
CPNE1-225ENST00000483495 P2RX2Q9UBL9 471 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 POMT2Q9UKY4 750 aa12.49□□□□□ -0.41
CPNE1-225ENST00000483495 PRAMEF27A3QJZ7 478 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 E9PQ18 207 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 B3GALT2O43825 422 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 UGT2B11O75310 529 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 FHP07954 510 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 PVRP15151 417 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 TNFRSF1BP20333 461 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 MATN1P21941 496 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 RYKP34925 604 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 OR1E2P47887 323 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 FASLGP48023 281 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 KHKP50053 298 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 HLCSP50747 726 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ANXA11P50995 505 aaKnown RBP12.48□□□□□ -0.41
CPNE1-225ENST00000483495 CDH15P55291 814 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 LIM2P55344 173 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 KCNC4Q03721 635 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 RUNX2Q13950 521 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ELOCQ15369 112 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 GPR19Q15760 415 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 DUSP7Q16829 419 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 ZNF750Q32MQ0 723 aa12.48□□□□□ -0.41
CPNE1-225ENST00000483495 DEFB134Q4QY38 66 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms