RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 IL20RBQ6UXL0 311 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 WASH2PQ6VEQ5 465 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ASCL4Q6XD76 172 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PRSS45Q7RTY3 260 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 TFAP2DQ7Z6R9 452 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 IGFN1Q86VF2 1251 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PAQR7Q86WK9 346 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ITPRIPQ8IWB1 547 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PAQR4Q8N4S7 273 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 PQLC3Q8N755 202 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 KBTBD3Q8NAB2 608 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DNAAF1Q8NEP3 725 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 OR4D6Q8NGJ1 314 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 RHEBL1Q8TAI7 183 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 OSR1Q8TAX0 266 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 SAP25Q8TEE9 199 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GDPD5Q8WTR4 605 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DNAAF4Q8WXU2 420 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ST8SIA1Q92185 356 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 NRGNQ92686 78 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CD101Q93033 1021 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 IGSF8Q969P0 613 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RAD51AP1Q96B01 352 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ASB9Q96DX5 294 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CERS2Q96G23 380 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 PLEKHA8Q96JA3 519 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 FOXN4Q96NZ1 517 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SLITRK1Q96PX8 696 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 TEFMQ96QE5 360 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 BBS4Q96RK4 519 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CCT8L2Q96SF2 557 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 MTERF1Q99551 399 aaKnown RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 TUBGCP2Q9BSJ2 902 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 CHID1Q9BWS9 393 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ANGPTL4Q9BY76 406 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SLC39A8Q9C0K1 460 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ZMYND12Q9H0C1 365 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RAB1BQ9H0U4 201 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 OR51B6Q9H340 312 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GOLPH3Q9H4A6 298 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 WDR55Q9H6Y2 383 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 TBC1D17Q9HA65 648 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SLC28A3Q9HAS3 691 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 LYRM4Q9HD34 91 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 TXNRD2Q9NNW7 524 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DNAJC4Q9NNZ3 241 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ANKRD10Q9NXR5 420 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 NKIRAS1Q9NYS0 192 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RSPH14Q9UHP6 348 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 UTS2RQ9UKP6 389 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 KCNJ14Q9UNX9 436 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 B9D1Q9UPM9 204 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 SATB2Q9UPW6 733 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 RASD1Q9Y272 281 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 ZNF510Q9Y2H8 683 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 GRIP1Q9Y3R0 1128 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 POLR3AO14802 1390 aaPredicted RBP3.85□□□□□ -1.79
VPS41-212ENST00000482217 KANK1Q14678 1352 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 DISP3Q9P2K9 1392 aa3.85□□□□□ -1.79
VPS41-212ENST00000482217 A0A087X0K7 114 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CCDC162PA2VCL2 907 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 A6NNC1 897 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PGRMC1O00264 195 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 PDXKO00764 312 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 DLGAP1O14490 977 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TOR1AO14656 332 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 FLRT2O43155 660 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GMNNO75496 209 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NDUFB10O96000 172 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GOT2P00505 430 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 PLAUP00749 431 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 FCER2P06734 321 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CRYGBP07316 175 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CHRNGP07510 517 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CD63P08962 238 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ANXA4P09525 319 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 CCNB1P14635 433 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MYL6BP14649 208 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SLC2A4P14672 509 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CPN1P15169 458 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ZNF18P17022 549 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GSTM3P21266 225 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 G0S2P27469 103 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CD38P28907 300 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TYK2P29597 1187 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GTF2H1P32780 548 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ID1P41134 155 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PRCPP42785 496 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NPBWR1P48145 328 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SLC9A3P48764 834 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GNG10P50151 68 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PPT1P50897 306 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 EMP2P54851 167 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PSMC5P62195 406 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CSNK1G2P78368 415 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CSTF1Q05048 431 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 CDH17Q12864 832 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 FOXF2Q12947 444 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms