RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 JSRP1Q96MG2 331 aaPredicted RBP15.91■□□□□ 0.14
RXRB-203ENST00000481441 PIP5K1AQ99755 562 aa15.91■□□□□ 0.14
RXRB-203ENST00000481441 BDH2Q9BUT1 245 aa15.91■□□□□ 0.14
RXRB-203ENST00000481441 NT5DC2Q9H857 520 aa15.91■□□□□ 0.14
RXRB-203ENST00000481441 PRDM7Q9NQW5 492 aa15.91■□□□□ 0.14
RXRB-203ENST00000481441 SMAD7O15105 426 aaKnown RBP15.9■□□□□ 0.14
RXRB-203ENST00000481441 SMPD2O60906 423 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 TRIM3O75382 744 aaPredicted RBP15.9■□□□□ 0.14
RXRB-203ENST00000481441 GDF1P27539 372 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 SF3B4Q15427 424 aaKnown RBP eCLIP15.9■□□□□ 0.145e-7■■■■□ 20.4
RXRB-203ENST00000481441 VASNQ6EMK4 673 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 ADNP2Q6IQ32 1131 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 TTC27Q6P3X3 843 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 PRSS57Q6UWY2 283 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 DND1Q8IYX4 353 aaKnown RBP15.9■□□□□ 0.14
RXRB-203ENST00000481441 FAM13CQ8NE31 585 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 ISL2Q96A47 359 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 DOHHQ9BU89 302 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 COPS7BQ9H9Q2 264 aaPredicted RBP15.9■□□□□ 0.14
RXRB-203ENST00000481441 LYRM4Q9HD34 91 aa15.9■□□□□ 0.14
RXRB-203ENST00000481441 MED12Q93074 2177 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 CDC7O00311 574 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 LRATO95237 230 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 FBXO45P0C2W1 286 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 PGAM1P18669 254 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 HPDP32754 393 aaPredicted RBP15.89■□□□□ 0.13
RXRB-203ENST00000481441 GDF5P43026 501 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 IGLV3-21P80748 117 aaPredicted RBP15.89■□□□□ 0.13
RXRB-203ENST00000481441 PPP2R2BQ00005 443 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 CDKL1Q00532 357 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 C18orf21Q32NC0 220 aaPredicted RBP15.89■□□□□ 0.13
RXRB-203ENST00000481441 GALNT7Q86SF2 657 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 KRT78Q8N1N4 520 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 NAT8LQ8N9F0 302 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 GABPB2Q8TAK5 448 aaPredicted RBP15.89■□□□□ 0.13
RXRB-203ENST00000481441 TRIB1Q96RU8 372 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 MAPKAP1Q9BPZ7 522 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 PITHD1Q9GZP4 211 aaPredicted RBP15.89■□□□□ 0.13
RXRB-203ENST00000481441 SLC17A6Q9P2U8 582 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 VWA7Q9Y334 891 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 IKBKGQ9Y6K9 419 aa15.89■□□□□ 0.13
RXRB-203ENST00000481441 SH3D21A4FU49 640 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ANKDD1BA6NHY2 528 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 HRKO00198 91 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 WDR47O94967 919 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 HPNP05981 417 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 COX7A2P14406 83 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 SERPINB3P29508 390 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 STT3AP46977 705 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 SLC6A12P48065 614 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 HNMTP50135 292 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 CDK9P50750 372 aaKnown RBP15.88■□□□□ 0.13
RXRB-203ENST00000481441 WHAMMP3Q1A5X7 153 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 NHSL2Q5HYW2 709 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ZNF793Q6ZN11 406 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 DGAT2L6Q6ZPD8 337 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 SYDE1Q6ZW31 735 aaPredicted RBP15.88■□□□□ 0.13
RXRB-203ENST00000481441 UBE3DQ7Z6J8 389 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 C9orf106Q8NAJ2 232 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ACTRT1Q8TDG2 376 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 PIGTQ969N2 578 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 WDYHV1Q96HA8 205 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ZNF597Q96LX8 424 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 F2RL3Q96RI0 385 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 RBM24Q9BX46 236 aaKnown RBP15.88■□□□□ 0.13
RXRB-203ENST00000481441 UBQLN3Q9H347 655 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 L2HGDHQ9H9P8 463 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 CALHM2Q9HA72 323 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 GALNT8Q9NY28 637 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 TRPS1Q9UHF7 1281 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ZNF490Q9ULM2 529 aaPredicted RBP15.88■□□□□ 0.13
RXRB-203ENST00000481441 CAMK2AQ9UQM7 478 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 SLC6A5Q9Y345 797 aa15.88■□□□□ 0.13
RXRB-203ENST00000481441 ANKRD33BA6NCL7 494 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 NPEPPSL1A6NEC2 478 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 TRIM64A6NGJ6 449 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 TRIM64BA6NI03 449 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 PGRMC1O00264 195 aaKnown RBP15.87■□□□□ 0.13
RXRB-203ENST00000481441 FGF17O60258 216 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 PRAMEF4O60810 478 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 ACSL3O95573 720 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 ZNF37AP17032 561 aaPredicted RBP15.87■□□□□ 0.13
RXRB-203ENST00000481441 KCNC1P48547 511 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 CHD3Q12873 2000 aaKnown RBP15.87■□□□□ 0.13
RXRB-203ENST00000481441 NTRK2Q16620 822 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 DCST1Q5T197 706 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 PRAMEF9Q5VWM5 478 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 FAM45BPQ6NSW5 357 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 YTHDF3Q7Z739 585 aaKnown RBP15.87■□□□□ 0.13
RXRB-203ENST00000481441 OR4N5Q8IXE1 308 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 C7orf57Q8NEG2 295 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 FAM45AQ8TCE6 357 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 ANKRD7Q92527 254 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 KCNC2Q96PR1 638 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 EGFL8Q99944 293 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 UGT2B28Q9BY64 529 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 RNF14Q9UBS8 474 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 OARD1Q9Y530 152 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 MED12LQ86YW9 2145 aa15.87■□□□□ 0.13
RXRB-203ENST00000481441 DSCAMO60469 2012 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms