RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CCL19Q99731 98 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 SFXN3Q9BWM7 321 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 CAPS2Q9BXY5 557 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 CALHM2Q9HA72 323 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 GALNT8Q9NY28 637 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 GPRC5BQ9NZH0 403 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 OARD1Q9Y530 152 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 IKBKGQ9Y6K9 419 aa14.75□□□□□ -0.05
DDX56-210ENST00000479440 NPEPPSL1A6NEC2 478 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 TRIM3O75382 744 aaPredicted RBP14.74□□□□□ -0.05
DDX56-210ENST00000479440 TRAPPC6AO75865 159 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 LRATO95237 230 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 AHSGP02765 367 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 IGKV3-11P04433 115 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 ZNF37AP17032 561 aaPredicted RBP14.74□□□□□ -0.05
DDX56-210ENST00000479440 FPR1P21462 350 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 CDK9P50750 372 aaKnown RBP14.74□□□□□ -0.05
DDX56-210ENST00000479440 ID2Q02363 134 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 NTRK2Q16620 822 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 NHSL2Q5HYW2 709 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 SPANXN3Q5MJ09 141 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 SYDE1Q6ZW31 735 aaPredicted RBP14.74□□□□□ -0.05
DDX56-210ENST00000479440 SRFBP1Q8NEF9 429 aaKnown RBP14.74□□□□□ -0.05
DDX56-210ENST00000479440 DIO2Q92813 273 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 FBXL20Q96IG2 436 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 GAL3ST4Q96RP7 486 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 NDRG3Q9UGV2 375 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 IKZF3Q9UKT9 509 aa14.74□□□□□ -0.05
DDX56-210ENST00000479440 ANKRD33BA6NCL7 494 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 CAPN14A8MX76 684 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 TP53I11O14683 189 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 HPNP05981 417 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 GCKP35557 465 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 MASP1P48740 699 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 BIKQ13323 160 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 RPS6KA2Q15349 733 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 VASNQ6EMK4 673 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 VN1R5Q7Z5H4 357 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 LUZP2Q86TE4 346 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 ADAMTSL2Q86TH1 951 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 TAGAPQ8N103 731 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 NKAPQ8N5F7 415 aaKnown RBP14.73□□□□□ -0.05
DDX56-210ENST00000479440 ANKRD7Q92527 254 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 CERS2Q96G23 380 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 SECISBP2Q96T21 854 aaKnown RBP14.73□□□□□ -0.05
DDX56-210ENST00000479440 ACBD3Q9H3P7 528 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 EHD1Q9H4M9 534 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 PRM3Q9NNZ6 103 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 TRPS1Q9UHF7 1281 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 VWA7Q9Y334 891 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 EML6Q6ZMW3 1958 aa14.73□□□□□ -0.05
DDX56-210ENST00000479440 IQANK1A0A1B0GTG1 560 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 CDC7O00311 574 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 CLGNO14967 610 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 FGF17O60258 216 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 SNX4O95219 450 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 TBX6O95947 436 aaPredicted RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 CYP4B1P13584 511 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 CPN2P22792 545 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 SLC6A12P48065 614 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 TMED10P49755 219 aaKnown RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 PGGT1BP53609 377 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 DIO3P55073 304 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 RPP38P78345 283 aaKnown RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 IGLV3-21P80748 117 aaPredicted RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 TOMM20Q15388 145 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 RNF111Q6ZNA4 994 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 NAT8LQ8N9F0 302 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 C9orf106Q8NAJ2 232 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 ANKRD9Q96BM1 317 aaPredicted RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 PERPQ96FX8 193 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 RBM18Q96H35 190 aaKnown RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 WDYHV1Q96HA8 205 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 MAPKAP1Q9BPZ7 522 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 PELOQ9BRX2 385 aaKnown RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 TBCDQ9BTW9 1192 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 UGT2B28Q9BY64 529 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 WWTR1Q9GZV5 400 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 UBQLN3Q9H347 655 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 PIGMQ9H3S5 423 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
DDX56-210ENST00000479440 PRDM7Q9NQW5 492 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 ADAM21Q9UKJ8 722 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 C15orf41Q9Y2V0 281 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 SLC6A5Q9Y345 797 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 TESMINQ9Y4I5 508 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 NCKAP5O14513 1909 aa14.72□□□□□ -0.05
DDX56-210ENST00000479440 TRIM64A6NGJ6 449 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 TRIM64BA6NI03 449 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 OR6C76A6NM76 312 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 HIST1H1TP22492 207 aaPredicted RBP14.71□□□□□ -0.05
DDX56-210ENST00000479440 ATP5A1P25705 553 aaKnown RBP14.71□□□□□ -0.05
DDX56-210ENST00000479440 GDF5P43026 501 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 SSR2P43308 183 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 HERVK_113P63132 956 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 ERVK-8P63133 956 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 EBPQ15125 230 aaKnown RBP14.71□□□□□ -0.05
DDX56-210ENST00000479440 SPRED3Q2MJR0 410 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 PAGE2BQ5JRK9 111 aa14.71□□□□□ -0.05
DDX56-210ENST00000479440 TTC27Q6P3X3 843 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms