RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GOT1P17174 413 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 CHRNB4P30926 498 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ACKR1Q16570 336 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 HFEQ30201 348 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ARHGEF16Q5VV41 709 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 TATDN1Q6P1N9 297 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ERC1Q8IUD2 1116 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ITPRIPQ8IWB1 547 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 SFRP1Q8N474 314 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 RTL3Q8N8U3 475 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR4C15Q8NGM1 316 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 FRAT1Q92837 279 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 NKX3-1Q99801 234 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 ANP32EQ9BTT0 268 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC39A8Q9C0K1 460 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 NAPBQ9H115 298 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 P2RY12Q9H244 342 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 PRMT8Q9NR22 394 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 NSG2Q9Y328 171 aa3.5□□□□□ -1.85
CDC42BPA-212ENST00000478573 CLRN2A0PK11 232 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAGEB16A2A368 324 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZBTB14O43829 449 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 HMMRO75330 724 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CRLF1O75462 422 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 GRAP2O75791 330 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 LETM1O95202 739 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 GNB3P16520 340 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 SRD5A2P31213 254 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR3A2P47893 321 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CLCN4P51793 760 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 UCP2P55851 309 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 DCDC1P59894 354 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 GSTO1P78417 241 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC3A1Q07837 685 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 ABRQ12979 859 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CBX3Q13185 183 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 TRA2AQ13595 282 aaKnown RBP eCLIP3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 GRB14Q14449 540 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 PTPN14Q15678 1187 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 IFI44LQ53G44 452 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF542PQ5EBM4 170 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR4C11Q6IEV9 310 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 DHRS11Q6UWP2 260 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 SIGLEC15Q6ZMC9 328 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 STXBP4Q6ZWJ1 553 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 ASPGQ86U10 573 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 LACC1Q8IV20 430 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 LAX1Q8IWV1 398 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CHCHD4Q8N4Q1 142 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 GPRC5AQ8NFJ5 357 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 FAM151AQ8WW52 585 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CFAP36Q96G28 342 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 LURAP1Q96LR2 239 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 TDRD1Q9BXT4 1180 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 TRIM7Q9C029 511 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 DEFB129Q9H1M3 183 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 CUEDC2Q9H467 287 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 TDRD3Q9H7E2 651 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 EPHA6Q9UF33 1036 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 LTBP2Q14767 1821 aa3.49□□□□□ -1.85
CDC42BPA-212ENST00000478573 A0A087WW49 117 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMEM129A0AVI4 362 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 GTPBP10A4D1E9 387 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 C5orf51A6NDU8 294 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 NKX6-3A6NJ46 265 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 A8MVM7 634 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 M0R296 226 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 VEGFDO43915 354 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 KIF5CO60282 957 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CYTIPO60759 359 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 SAP30O75446 220 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CLN5O75503 358 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 SBK2P0C263 348 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CEACAM1P13688 526 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CEBPBP17676 345 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF10P21506 573 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ADORA1P30542 326 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ATP6V1E1P36543 226 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 LEPRP48357 1165 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 LBX1P52954 281 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 GNB1P62873 340 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CSNK2BP67870 215 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 SP3Q02447 781 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 GUCY2DQ02846 1103 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 PPIL2Q13356 520 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 EFTUD2Q15029 972 aaKnown RBP eCLIP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 FGD3Q5JSP0 725 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 APOBEC3HQ6NTF7 200 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 MACC1Q6ZN28 852 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 BTN2A1Q7KYR7 527 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 RABEPKQ7Z6M1 372 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF410Q86VK4 478 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 DCLK2Q8N568 766 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ARL10Q8N8L6 244 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMEM178AQ8NBL3 297 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 MAPK1IP1LQ8NDC0 245 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 OR8H1Q8NGG4 311 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms