RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KLHL41O60662 606 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 DPM1O60762 260 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ATP6AP2O75787 350 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 GPR75O95800 540 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ALOX15P16050 662 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 GRK2P25098 689 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PTGER1P34995 402 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 STT3AP46977 705 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SOX8P57073 446 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ARG2P78540 354 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF763Q0D2J5 394 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 BST1Q10588 318 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 KLRB1Q12918 225 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TERF2Q15554 542 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF750Q32MQ0 723 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 NADK2Q4G0N4 442 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 CRB2Q5IJ48 1285 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 JMJD6Q6NYC1 403 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ISLR2Q6UXK2 745 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TMEM132CQ8N3T6 1108 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZADH2Q8N4Q0 377 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 B3GNT7Q8NFL0 401 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 OR6Y1Q8NGX8 325 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 OR14A16Q8NHC5 309 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 DNAJB14Q8TBM8 379 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SLC2A12Q8TD20 617 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 C16orf78Q8WTQ4 265 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PTPMT1Q8WUK0 201 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PSMF1Q92530 271 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TM9SF4Q92544 642 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 DAZLQ92904 295 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TM4SF18Q96CE8 201 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 RBM18Q96H35 190 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SH3GL2Q99962 352 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 C1orf50Q9BV19 199 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 C20orf27Q9GZN8 174 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ACBD3Q9H3P7 528 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 MMP25Q9NPA2 562 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF446Q9NWS9 450 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 C1orf109Q9NX04 203 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PLA2G3Q9NZ20 509 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 VTI1BQ9UEU0 232 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TEKT2Q9UIF3 430 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PCDHA9Q9Y5H5 950 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 CSAG2Q9Y5P2 127 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 C1orf226A1L170 272 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 DYTNA2CJ06 578 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 SYNDIG1LA6NDD5 238 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 HMGB1P1B2RPK0 211 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 HRKO00198 91 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 LSM1O15116 133 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 DYRK3O43781 588 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 MAN1A2O60476 641 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 PEX11AO75192 247 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 JUNP05412 331 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 SOX11P35716 441 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 FEN1P39748 380 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 CLCN2P51788 898 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 XKP51811 444 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 IGLV3-21P80748 117 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 MFAP5Q13361 173 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 UGT3A2Q3SY77 523 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 C6orf163Q5TEZ5 329 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ABHD17BQ5VST6 288 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 NOXRED1Q6NXP6 359 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 SLC48A1Q6P1K1 146 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 DGAT2L6Q6ZPD8 337 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 CRLF3Q8IUI8 442 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ST13P4Q8IZP2 240 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 BEST3Q8N1M1 668 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 SLC5A8Q8N695 610 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF321PQ8N8H1 164 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 APCDD1LQ8NCL9 501 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 NFAM1Q8NET5 270 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 OR4K14Q8NGD5 310 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 CLHC1Q8NHS4 586 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ELP5Q8TE02 316 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 DYDC1Q8WWB3 177 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 GFM2Q969S9 779 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 EXOSC8Q96B26 276 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 C19orf60Q96EN9 201 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 VMP1Q96GC9 406 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 C3orf30Q96M34 536 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 SORT1Q99523 831 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 DEFB126Q9BYW3 111 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ILKAPQ9H0C8 392 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 LIN28AQ9H9Z2 209 aaKnown RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 ANKRD10Q9NXR5 420 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 MAP10Q9P2G4 905 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 HEY2Q9UBP5 337 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 COPS7AQ9UBW8 275 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 MARCOQ9UEW3 520 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-215ENST00000478531 UTS2RQ9UKP6 389 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 RAP2CQ9Y3L5 183 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 CCL27Q9Y4X3 112 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 EML6Q6ZMW3 1958 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms