RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ZNF621Q6ZSS3 439 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ELP4Q96EB1 424 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 TCTN2Q96GX1 697 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ZSCAN32Q9NX65 697 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 A0A0G2JN53 185 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 A0A1B0GTQ1 180 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 PDLIM1O00151 329 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 GFERP55789 205 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 HNRNPKP61978 463 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 BNIP3Q12983 259 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 PRAMEF8Q5VWM4 474 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 PRAMEF7Q5VXH5 474 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 SHQ1Q6PI26 577 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 CEP68Q76N32 757 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 VTCN1Q7Z7D3 282 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 IFNEQ86WN2 208 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 CATSPER1Q8NEC5 780 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 FAM46DQ8NEK8 389 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 PNPT1Q8TCS8 783 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 FIG4Q92562 907 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 TACO1Q9BSH4 297 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 TMEM9Q9P0T7 183 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 ZW10O43264 779 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 MYF6P23409 242 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 EPHA8P29322 1005 aaPredicted RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 XCR1P46094 333 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 TSTA3Q13630 321 aaPredicted RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 TAF11Q15544 211 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 OOSP2Q86WS3 158 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 D2HGDHQ8N465 521 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 SRFBP1Q8NEF9 429 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 LMX1AQ8TE12 382 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 NLGN3Q9NZ94 848 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 KCNE3Q9Y6H6 103 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 AK5Q9Y6K8 562 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 BSNQ9UPA5 3926 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 B4DGG1 531 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 DCTP40126 519 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 NPTX1Q15818 432 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF630Q2M218 657 aaPredicted RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 KDM4DQ6B0I6 523 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 ZCCHC8Q6NZY4 707 aaKnown RBP11.4□□□□□ -0.58
PRPF39-203ENST00000477626 OR7G2Q8NG99 324 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 OR5AK3PQ8NH89 298 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 TMBIM1Q969X1 311 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 MAP3K3Q99759 626 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 AMBRA1Q9C0C7 1298 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 SAP130Q9H0E3 1048 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF696Q9H7X3 374 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 SH3BP4Q9P0V3 963 aa11.4□□□□□ -0.58
PRPF39-203ENST00000477626 A0A1B0GVT2 93 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 STK25O00506 426 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CPSF4O95639 269 aaKnown RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 GNAO1P09471 354 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 FASP25445 335 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 GRK3P35626 688 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 SSR2P43308 183 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 RAB8AP61006 207 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 BTN3A2P78410 334 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 DEFB133Q30KQ1 61 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 TRIM40Q6P9F5 258 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 C6orf120Q7Z4R8 191 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CBR4Q8N4T8 237 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ZFP28Q8NHY6 868 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ZBED6CLQ96FA7 236 aaPredicted RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 HSH2DQ96JZ2 352 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ELF4Q99607 663 aaPredicted RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 LANCL2Q9NS86 450 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 FBXO4Q9UKT5 387 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 SAMD4AQ9UPU9 718 aaKnown RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 IGKV3D-11A0A0A0MRZ8 115 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 A0A1B0GTW7 788 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 TLCD2A6NGC4 264 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 A8MVJ9 347 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CHRM4P08173 479 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 GLB1P16278 677 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 FAM53BQ14153 422 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 TEAD4Q15561 434 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CCDC6Q16204 474 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 C6orf52Q5T4I8 152 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 C1orf210Q8IVY1 113 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 METTL25Q8N6Q8 603 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 OR5T3Q8NGG3 340 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 RNF145Q96MT1 663 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CD180Q99467 661 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 DOHHQ9BU89 302 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 UGT2B28Q9BY64 529 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 A0A087WV62 115 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 MT-ND1P03886 318 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 IST1P53990 364 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 ZC3H12BQ5HYM0 836 aaKnown RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 SLC30A8Q8IWU4 369 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 CAMKVQ8NCB2 501 aa11.39□□□□□ -0.59
PRPF39-203ENST00000477626 N4BP2L2Q92802 583 aaPredicted RBP11.39□□□□□ -0.59
PRPF39-203ENST00000477626 FGF11Q92914 225 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms