RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 A0A088AWK7 358 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF354AO60765 605 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CTNSO60931 367 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 LYPLA1O75608 230 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 DDAH2O95865 285 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CHRNGP07510 517 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF10P21506 573 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 TGM3Q08188 693 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CDYL2Q8N8U2 506 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 B3GNT7Q8NFL0 401 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CHMP6Q96FZ7 201 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 C20orf27Q9GZN8 174 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 KLHL1Q9NR64 748 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 HIVEP3Q5T1R4 2406 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 FOXE1O00358 373 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 PGRMC2O15173 223 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ZNHIT1O43257 154 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 PROM1O43490 865 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 NEURL1O76050 574 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ESRRBO95718 433 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 IFNA16P05015 189 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 PTX3P26022 381 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 MST1P26927 711 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 SERPINB1P30740 379 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 PTGER1P34995 402 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 FOXA1P55317 472 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 FOLH1Q04609 750 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 OR1C1Q15619 314 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF750Q32MQ0 723 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 GGTA1PQ4G0N0 100 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 SCIMPQ6UWF3 145 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 GPRIN3Q6ZVF9 776 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 GPR180Q86V85 440 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ATCAYQ86WG3 371 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 RPS19BP1Q86WX3 136 aaKnown RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 SRFBP1Q8NEF9 429 aaKnown RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 AGAP11Q8TF27 550 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF354BQ96LW1 612 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF317Q96PQ6 595 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 SORT1Q99523 831 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 RNF32Q9H0A6 362 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 DDX31Q9H8H2 851 aaKnown RBP16.44■□□□□ 0.22
PTPN7-209ENST00000477554 SLCO1B3Q9NPD5 702 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 TIMM22Q9Y584 194 aa16.44■□□□□ 0.22
PTPN7-209ENST00000477554 TRAV17A0A0B4J275 112 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 CLDN4O14493 209 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 EDF1O60869 148 aaKnown RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 AIFM1O95831 613 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 KLK1P06870 262 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 FGF4P08620 206 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ARRB2P32121 409 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 HK2P52789 917 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 MLF1P58340 268 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 TNFRSF17Q02223 184 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 CUL3Q13618 768 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 MEP1AQ16819 746 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF324BQ6AW86 544 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ZCCHC7Q8N3Z6 543 aaKnown RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 PRR7Q8TB68 274 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF395Q9H8N7 513 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ADAP2Q9NPF8 381 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 VTI1BQ9UEU0 232 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 ADGRE2Q9UHX3 823 aa16.43■□□□□ 0.22
PTPN7-209ENST00000477554 PPIEQ9UNP9 301 aaKnown RBP16.43■□□□□ 0.22
PTPN7-209ENST00000477554 LRRK2Q5S007 2527 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 GMNCA6NCL1 334 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 PRAMEF2O60811 474 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 CRCPO75575 148 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ENO1P06733 434 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 FAM58BPP0C7Q3 252 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 RPL14P50914 215 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 IGLV3-21P80748 117 aaPredicted RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 STX4Q12846 297 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 UBAP2LQ14157 1087 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF766Q5HY98 468 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 SH2D4BQ5SQS7 431 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 FAM180BQ6P0A1 224 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 CLYBLQ8N0X4 340 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 SLC5A8Q8N695 610 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF781Q8N8C0 355 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 PIWIL2Q8TC59 973 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ADAMTS18Q8TE60 1221 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 FAR1Q8WVX9 515 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 REPS1Q96D71 796 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 DEFB126Q9BYW3 111 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 SHCBP1LQ9BZQ2 653 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 OR8D2Q9GZM6 311 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ROGDIQ9GZN7 287 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 NSRP1Q9H0G5 558 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 RPF2Q9H7B2 306 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 TRPS1Q9UHF7 1281 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ZDHHC2Q9UIJ5 367 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 SLC12A4Q9UP95 1085 aa16.42■□□□□ 0.22
PTPN7-209ENST00000477554 MRPS33Q9Y291 106 aaKnown RBP16.42■□□□□ 0.22
PTPN7-209ENST00000477554 ZGRF1Q86YA3 2104 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms