RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MUC13Q9H3R2 512 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 DPEP3Q9H4B8 488 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ASB8Q9H765 288 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TRIM45Q9H8W5 580 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 SLC40A1Q9NP59 571 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 NT5MQ9NPB1 228 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MKKSQ9NPJ1 570 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 SAMSN1Q9NSI8 373 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 SETD4Q9NVD3 440 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 FAIMQ9NVQ4 179 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PAG1Q9NWQ8 432 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TAB2Q9NYJ8 693 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CNIH4Q9P003 139 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 APOBEC3BQ9UH17 382 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 LNPEPQ9UIQ6 1025 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZNF229Q9UJW7 825 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PACSIN2Q9UNF0 486 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 SNX7Q9UNH6 387 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 RNF24Q9Y225 148 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CHKBQ9Y259 395 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PLLPQ9Y342 182 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 POMT1Q9Y6A1 747 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 AP4B1Q9Y6B7 739 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 UBE4BO95155 1302 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 NRCAMQ92823 1304 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TNRQ92752 1358 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CPSF1Q10570 1443 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 CUX2O14529 1486 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MRC2Q9UBG0 1479 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 BAZ1AQ9NRL2 1556 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 A0A075B6Q4 140 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 A0A087X002 238 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 A0A1W2PQ09 198 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RAB19A4D1S5 217 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 BTBD17A6NE02 478 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ZNF233A6NK53 670 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ZNF98A6NK75 572 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OR6C76A6NM76 312 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 E7ENQ6 273 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 WRBO00258 174 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 POLR1CO15160 346 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 LDLRAD4O15165 306 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SMAD9O15198 467 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 TOX3O15405 576 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 LRRTM2O43300 516 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ZSCAN12O43309 604 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TLX2O43763 284 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 PRKNO60260 465 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 TRIM3O75382 744 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 PSMD10O75832 226 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RPP14O95059 124 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 KCNK5O95279 499 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RAB3DO95716 219 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 DHFRP00374 187 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 AK1P00568 194 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 EGFP01133 1207 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 APOA1P02647 267 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 FABP1P07148 127 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CAPN1P07384 714 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 HBQ1P09105 142 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CD3GP09693 182 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 UQCRFS1P1P0C7P4 283 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SUPT20HL2P0C7V6 817 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 PLA2G4BP0C869 781 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TNNI3P19429 210 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SRMP19623 302 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MX1P20591 662 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 HNRNPA2B1P22626 353 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 TUBG1P23258 451 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 PSMA5P28066 241 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CST5P28325 142 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 PPP2R1AP30153 589 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OXTRP30559 389 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CHRNA3P32297 505 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ARL3P36405 182 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ATP5C1P36542 298 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 SPAM1P38567 509 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CRATP43155 626 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CSNK1DP48730 415 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 NPY2RP49146 381 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SERPINB9P50453 376 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 BLKP51451 505 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RAP1GDS1P52306 607 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 KIAA1024LP59773 190 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RPL24P83731 157 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 HPCAP84074 193 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CEBPZQ03701 1054 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 ZNF33AQ06730 810 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 C2orf54Q08AI8 447 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ABRQ12979 859 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 PRKAA1Q13131 559 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLC12A1Q13621 1099 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 KARSQ15046 597 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD20A4Q4UJ75 823 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TECRLQ5HYJ1 363 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 EOGTQ5NDL2 527 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 PLEKHS1Q5SXH7 462 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 C18orf63Q68DL7 685 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 JADE1Q6IE81 842 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 FAAP20Q6NZ36 180 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms