RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CPSF7Q8N684 471 aaKnown RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 C16orf52Q8NHV5 167 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 UTP15Q8TED0 518 aaKnown RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 CCT6BQ92526 530 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TSLPQ969D9 159 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 DMRTA2Q96SC8 542 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 NDNQ99608 321 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 MACROD1Q9BQ69 325 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF559Q9BR84 538 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TRIM51Q9BSJ1 452 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 RHBGQ9H310 441 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 ADAP2Q9NPF8 381 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 PNO1Q9NRX1 252 aaKnown RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 KCNN3Q9UGI6 736 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 MED16Q9Y2X0 877 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 CLCA3PQ9Y6N3 262 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 A0A1B0GTH9 108 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CES2O00748 559 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ITGA10O75578 1167 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 MYO1DO94832 1006 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 IGHA1P01876 353 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 S100BP04271 92 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 IFNA16P05015 189 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 COX7A2P14406 83 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 NAT1P18440 290 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 TNNI3P19429 210 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 RAB38P57729 211 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SERTAD2Q14140 314 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 PAGE2BQ5JRK9 111 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SPNS3Q6ZMD2 512 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ADAMTSL2Q86TH1 951 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 DND1Q8IYX4 353 aaKnown RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ZFP62Q8NB50 900 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CHDHQ8NE62 594 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 NUP43Q8NFH3 380 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OR5T3Q8NGG3 340 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ACTRT1Q8TDG2 376 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 NEIL2Q969S2 332 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 UBE2E3Q969T4 207 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 PYCR2Q96C36 320 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 TSPAN17Q96FV3 270 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 HES7Q9BYE0 225 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 NT5DC2Q9H857 520 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SYNPO2LQ9H987 977 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 GPRC5BQ9NZH0 403 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 TXNDC16Q9P2K2 825 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CTNNAL1Q9UBT7 734 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 COPS7AQ9UBW8 275 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 A8MUA0 341 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 DNALI1O14645 258 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ZSCAN12O43309 604 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ZWINTO95229 277 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 AHSGP02765 367 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 P04436 131 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 C1GALT1C1LP0DN25 315 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 HNF4AP41235 474 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 KIR2DL2P43627 348 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ARL4CP56559 192 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 RAB8AP61006 207 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OLR1P78380 273 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 BTN3A2P78410 334 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 STX4Q12846 297 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 MORF4L2Q15014 288 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ELAVL1Q15717 326 aaKnown RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 RNASEH2BQ5TBB1 312 aaKnown RBP6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OPN5Q6U736 354 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 TMIGD1Q6UXZ0 262 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 HSDL2Q6YN16 418 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 MBOAT1Q6ZNC8 495 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 MORN4Q8NDC4 146 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OR5M3Q8NGP4 307 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OR2W6PQ8NHA6 318 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OR14A16Q8NHC5 309 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 LILRB4Q8NHJ6 448 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CDKL2Q92772 493 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SARAFQ96BY9 339 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ART5Q96L15 291 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SGCZQ96LD1 299 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 SERINC2Q96SA4 455 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 NPAS2Q99743 824 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CENPKQ9BS16 269 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 POPDC3Q9HBV1 291 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 PPP2R2CQ9Y2T4 447 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 OARD1Q9Y530 152 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 ASB1Q9Y576 335 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CELSR2Q9HCU4 2923 aa6.75□□□□□ -1.33
BRCA1-214ENST00000477152 CACNA1CQ13936 2221 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 OR2W5A6NFC9 320 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 HS6ST1O60243 411 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 WDR47O94967 919 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 GABRA1P14867 456 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 MAOAP21397 527 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CNR1P21554 472 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 FUT4P22083 530 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 PPP2R1BP30154 601 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 SERPINB1P30740 379 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 MTTPP55157 894 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CDKN2DP55273 166 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms