RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DOHHQ9BU89 302 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 RBM24Q9BX46 236 aaKnown RBP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 UBQLN3Q9H347 655 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 CALHM2Q9HA72 323 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 PRDM7Q9NQW5 492 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 GALNT8Q9NY28 637 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 CAMK2AQ9UQM7 478 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 PRR14LQ5THK1 2151 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 ANKRD33BA6NCL7 494 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 HRKO00198 91 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 H2AFYO75367 372 aaKnown RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 CRLF1O75462 422 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 TRAPPC6AO75865 159 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 ACSL3O95573 720 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 HPNP05981 417 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 CCDC175P0C221 793 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 BMP7P18075 431 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 GNAZP19086 355 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 GSTM2P28161 218 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 SERPINB3P29508 390 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 CDK9P50750 372 aaKnown RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 IGLV3-21P80748 117 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 FOXF2Q12947 444 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 NHSL2Q5HYW2 709 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 ADNP2Q6IQ32 1131 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 SYDE1Q6ZW31 735 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 GABPB2Q8TAK5 448 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 WDYHV1Q96HA8 205 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 PDLIM5Q96HC4 596 aaKnown RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 ZNF597Q96LX8 424 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 BAG1Q99933 345 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 MAPKAP1Q9BPZ7 522 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 UGT2B28Q9BY64 529 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 NT5DC2Q9H857 520 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 LYRM4Q9HD34 91 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 EIF3LQ9Y262 564 aaKnown RBP10.4□□□□□ -0.74
BRCA1-213ENST00000476777 SLC6A5Q9Y345 797 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 NPFFR2Q9Y5X5 522 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 IKBKGQ9Y6K9 419 aa10.4□□□□□ -0.74
BRCA1-213ENST00000476777 CASKO14936 926 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 SIAH2O43255 324 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 FGF17O60258 216 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 ERN1O75460 977 aaKnown RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 KRT14P02533 472 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 TMIGD3P0DMS9 266 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 COX7A2P14406 83 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 HPDP32754 393 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 GDF5P43026 501 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 MSH2P43246 934 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 STT3AP46977 705 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 LSM11P83369 360 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 CBLBQ13191 982 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 CRYMQ14894 314 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 NTRK2Q16620 822 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 DCST1Q5T197 706 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 FNDC7Q5VTL7 733 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 BICRALQ6AI39 1079 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF793Q6ZN11 406 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 DGAT2L6Q6ZPD8 337 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 UBE3DQ7Z6J8 389 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 LUZP2Q86TE4 346 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 CNTN4Q8IWV2 1026 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 KRT78Q8N1N4 520 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 PPP1R14CQ8TAE6 165 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 MAIP1Q8WWC4 291 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 NTNG2Q96CW9 530 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 PERPQ96FX8 193 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 F2RL3Q96RI0 385 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 CCL19Q99731 98 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 SFXN3Q9BWM7 321 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 PITHD1Q9GZP4 211 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 COPS7BQ9H9Q2 264 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 C6orf203Q9P0P8 240 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-213ENST00000476777 SLC17A6Q9P2U8 582 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 VWA7Q9Y334 891 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 TESMINQ9Y4I5 508 aa10.39□□□□□ -0.75
BRCA1-213ENST00000476777 ANKDD1BA6NHY2 528 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 CDC7O00311 574 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 WDR47O94967 919 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 CNOT4O95628 575 aaKnown RBP10.38□□□□□ -0.75
BRCA1-213ENST00000476777 PGAM1P18669 254 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 SOX18P35713 384 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 SLCO1A2P46721 670 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 CPA2P48052 419 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 SLC6A12P48065 614 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 KCNC1P48547 511 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 HNMTP50135 292 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 CDKL1Q00532 357 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 ACKR1Q16570 336 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 EIPR1Q53HC9 387 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 TBCELQ5QJ74 424 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 GALNT7Q86SF2 657 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 OR4N5Q8IXE1 308 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 SLC44A1Q8WWI5 657 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 DIO2Q92813 273 aa10.38□□□□□ -0.75
BRCA1-213ENST00000476777 ABTB1Q969K4 478 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms