RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TBC1D31Q96DN5 1066 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 C14orf79Q96F83 325 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 COG3Q96JB2 828 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 CAPNS2Q96L46 248 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ALKBH3Q96Q83 286 aaPredicted RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 SLC25A19Q9HC21 320 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 TEX10Q9NXF1 929 aaPredicted RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 TAS2R3Q9NYW6 316 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ATG4BQ9Y4P1 393 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 FAM205AQ6ZU69 1335 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 LOC390937A0A1W2PQ73 354 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 TXNL1O43396 289 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 SNAP91O60641 907 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 APRTP07741 180 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 GHRP10912 638 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 MAT2AP31153 395 aaKnown RBP4.94□□□□□ -1.62
VPS50-212ENST00000476413 ACADSBP45954 432 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 HILS1P60008 231 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 HTD2P86397 168 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 KLF5Q13887 457 aaPredicted RBP4.94□□□□□ -1.62
VPS50-212ENST00000476413 LY6DQ14210 128 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 SLC17A1Q14916 467 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 NECTIN1Q15223 517 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 CEBPEQ15744 281 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 C1orf189Q5VU69 101 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 KCNMB4Q86W47 210 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 LRRC17Q8N6Y2 441 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 RNF148Q8N7C7 305 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 CHDHQ8NE62 594 aaPredicted RBP4.94□□□□□ -1.62
VPS50-212ENST00000476413 OR52B6Q8NGF0 335 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 RSPH1Q8WYR4 309 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 POM121L2Q96KW2 1035 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 PRICKLE1Q96MT3 831 aaPredicted RBP4.94□□□□□ -1.62
VPS50-212ENST00000476413 KCNK13Q9HB14 408 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 NGBQ9NPG2 151 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 HPS4Q9NQG7 708 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 HOMER3Q9NSC5 361 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 HPF1Q9NWY4 346 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 VPS54Q9P1Q0 977 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 THEGQ9P2T0 379 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 CLIP2Q9UDT6 1046 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 PLA2G4CQ9UP65 541 aa4.94□□□□□ -1.62
VPS50-212ENST00000476413 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 IQCMA0A1B0GVH7 501 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 RGSL1A5PLK6 1076 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 K7EQG2 157 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TRAFD1O14545 582 aaPredicted RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 ZNF749O43361 778 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 SSX5O60225 188 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TRIM16O95361 564 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 FCER2P06734 321 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 PROS1P07225 676 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 HIST1H2AGP0C0S8 130 aaPredicted RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 GNSP15586 552 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 DNAJB1P25685 340 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 PKLRP30613 574 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 CHRNA3P32297 505 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 HSPA1LP34931 641 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 ASMTP46597 345 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 SLC6A8P48029 635 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TMEM50BP56557 158 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 RPS4XP62701 263 aaKnown RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 RPS27AP62979 156 aaKnown RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 SPP2Q13103 211 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 NFATC2Q13469 925 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 AGKQ53H12 422 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 LIPKQ5VXJ0 399 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 Q6ZTC4 211 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TMEM26Q6ZUK4 368 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 TBC1D10CQ8IV04 446 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TCP11Q8WWU5 503 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 HIST1H2ACQ93077 130 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 AGAP4Q96P64 663 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 ACCSQ96QU6 501 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 OPRPNQ99935 248 aaPredicted RBP4.93□□□□□ -1.62
VPS50-212ENST00000476413 FGFBP2Q9BYJ0 223 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 ATG10Q9H0Y0 220 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 NMUR1Q9HB89 426 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 TXLNGQ9NUQ3 528 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 LHX3Q9UBR4 397 aa4.93□□□□□ -1.62
VPS50-212ENST00000476413 IGHV4-30-2A0A087WSY4 118 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 SOCS3O14543 225 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 SH2D1BO14796 132 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 TSPAN2O60636 221 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 TRIM23P36406 574 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ID1P41134 155 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 NPY2RP49146 381 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 PDIA5Q14554 519 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 FASTKD3Q14CZ7 662 aaKnown RBP4.92□□□□□ -1.62
VPS50-212ENST00000476413 TRADDQ15628 312 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 CARTPTQ16568 116 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 CLPPQ16740 277 aaPredicted RBP4.92□□□□□ -1.62
VPS50-212ENST00000476413 ZSWIM7Q19AV6 140 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ZC2HC1BQ5TFG8 222 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 STEAP1BQ6NZ63 245 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 SYVN1Q86TM6 617 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 AMZ2Q86W34 360 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ERC1Q8IUD2 1116 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 METTL4Q8N3J2 472 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms